RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 SPZ1Q9BXG8 430 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 HMX1Q9NP08 348 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-212ENST00000582122 MAP3K20Q9NYL2 800 aaKnown RBP12.1□□□□□ -0.47
TOP3A-212ENST00000582122 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
TOP3A-212ENST00000582122 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
TOP3A-212ENST00000582122 DNAJC25-GNG10A0A024R161 153 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 PNMA6FA0A0J9YX94 578 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 GJB1P08034 283 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 ELNP15502 786 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 ZNF792Q3KQV3 632 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 STAG2Q8N3U4 1231 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 RRP36Q96EU6 259 aaKnown RBP12.09□□□□□ -0.47
TOP3A-212ENST00000582122 JMJD4Q9H9V9 463 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 HOMER2Q9NSB8 354 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
TOP3A-212ENST00000582122 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-212ENST00000582122 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
TOP3A-212ENST00000582122 ASB14A6NK59 587 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 COBLO75128 1261 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 CCL5P13501 91 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 MAP3K21Q5TCX8 1036 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 MAMDC4Q6UXC1 1216 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 Q6ZUG5 572 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 MICU3Q86XE3 530 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 TRIB2Q92519 343 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 MAML3Q96JK9 1138 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 RNF208Q9H0X6 261 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 ALDH8A1Q9H2A2 487 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-212ENST00000582122 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 ZSWIM8A7E2V4 1837 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
TOP3A-212ENST00000582122 KLF18A0A0U1RQI7 1052 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
TOP3A-212ENST00000582122 EVCP57679 992 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 RTN1Q16799 776 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 CPLX2Q6PUV4 134 aaKnown RBP12.07□□□□□ -0.48
TOP3A-212ENST00000582122 RNF207Q6ZRF8 634 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 DNERQ8NFT8 737 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 A1CFQ9NQ94 594 aaKnown RBP12.07□□□□□ -0.48
TOP3A-212ENST00000582122 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-212ENST00000582122 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 CYP39A1Q9NYL5 469 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 CNPY2Q9Y2B0 182 aa12.07□□□□□ -0.48
TOP3A-212ENST00000582122 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 GOLGA8AA7E2F4 631 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 IGHA2P01877 340 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 GJA8P48165 433 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 METAP2P50579 478 aaKnown RBP eCLIP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 SNAP25P60880 206 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 CACNB2Q08289 660 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 USH1GQ495M9 461 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 NSMFQ6X4W1 530 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 TMTC3Q6ZXV5 915 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 BRF1Q92994 677 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 ZNF274Q96GC6 653 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-212ENST00000582122 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
TOP3A-212ENST00000582122 NID2Q14112 1375 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 ZNFX1Q9P2E3 1918 aaKnown RBP12.05□□□□□ -0.48
TOP3A-212ENST00000582122 PGK2P07205 417 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 CCL14Q16627 93 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 MUM1L1Q5H9M0 696 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 CLEC4DQ8WXI8 215 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 MYL10Q9BUA6 226 aa12.05□□□□□ -0.48
TOP3A-212ENST00000582122 H0YGN5 161 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 NFIBO00712 420 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 SEPT4O43236 478 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 CYTH3O43739 400 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 SGPL1O95470 568 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 CYP2C19P33261 490 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 RPS6P62753 249 aaKnown RBP12.04□□□□□ -0.48
TOP3A-212ENST00000582122 AKAP17AQ02040 695 aaKnown RBP12.04□□□□□ -0.48
TOP3A-212ENST00000582122 GHRHRQ02643 423 aa12.04□□□□□ -0.48
TOP3A-212ENST00000582122 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms