RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
NDEL1-208ENST00000580237 CYP39A1Q9NYL5 469 aa12.7□□□□□ -0.38
NDEL1-208ENST00000580237 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 ASB14A6NK59 587 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 DNM1LO00429 736 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 IGHA2P01877 340 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 CALML3P27482 149 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 ANTXR2P58335 489 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 GRM4Q14833 912 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
NDEL1-208ENST00000580237 MAMDC4Q6UXC1 1216 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 SLC30A10Q6XR72 485 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 HOMER1Q86YM7 354 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 CCDC144CPQ8IYA2 1237 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 C7orf61Q8IZ16 206 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
NDEL1-208ENST00000580237 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
NDEL1-208ENST00000580237 ABHD16BQ9H3Z7 469 aa12.69□□□□□ -0.38
NDEL1-208ENST00000580237 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
NDEL1-208ENST00000580237 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
NDEL1-208ENST00000580237 ABCB11O95342 1321 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 DDAH1O94760 285 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 REC8O95072 547 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 KIF5BP33176 963 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 ACVR2BQ13705 512 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
NDEL1-208ENST00000580237 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 QRICH1Q2TAL8 776 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 NOL8Q76FK4 1167 aaKnown RBP12.68□□□□□ -0.38
NDEL1-208ENST00000580237 RNF180Q86T96 592 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 FBXO11Q86XK2 927 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 LENG1Q96BZ8 264 aaPredicted RBP12.68□□□□□ -0.38
NDEL1-208ENST00000580237 TMEM87BQ96K49 555 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 FGD4Q96M96 766 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 KIAA1217Q5T5P2 1943 aa12.68□□□□□ -0.38
NDEL1-208ENST00000580237 H0YGN5 161 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-208ENST00000580237 SNAI1O95863 264 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-208ENST00000580237 ZNF865P0CJ78 1059 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-208ENST00000580237 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-208ENST00000580237 FGD1P98174 961 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 KRT32Q14532 448 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 MYL10Q9BUA6 226 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 AMNQ9BXJ7 453 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
NDEL1-208ENST00000580237 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 MAD2L2Q9UI95 211 aa12.67□□□□□ -0.38
NDEL1-208ENST00000580237 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 B4DLN1 442 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 PGK1P00558 417 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 ALDH5A1P51649 535 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-208ENST00000580237 MRPL12P52815 198 aaKnown RBP12.66□□□□□ -0.38
NDEL1-208ENST00000580237 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-208ENST00000580237 RPS6P62753 249 aaKnown RBP12.66□□□□□ -0.38
NDEL1-208ENST00000580237 TRAF1Q13077 416 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 LRRC41Q15345 812 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 FBXO16Q8IX29 292 aaPredicted RBP12.66□□□□□ -0.38
NDEL1-208ENST00000580237 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 IGDCC4Q8TDY8 1250 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 MRPL11Q9Y3B7 192 aaKnown RBP12.66□□□□□ -0.38
NDEL1-208ENST00000580237 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
NDEL1-208ENST00000580237 SYNRGQ9UMZ2 1314 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
NDEL1-208ENST00000580237 ZBTB5O15062 677 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 C6orf222P0C671 652 aaPredicted RBP12.65□□□□□ -0.38
NDEL1-208ENST00000580237 CALM1P0DP23 149 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 CALM2P0DP24 149 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 CALM3P0DP25 149 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 COL6A1P12109 1028 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 PDE4DQ08499 809 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 TROAPQ12815 778 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 PURBQ96QR8 312 aaKnown RBP12.65□□□□□ -0.38
NDEL1-208ENST00000580237 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
NDEL1-208ENST00000580237 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
NDEL1-208ENST00000580237 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
NDEL1-208ENST00000580237 ASTN1O14525 1302 aa12.64□□□□□ -0.39
NDEL1-208ENST00000580237 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms