RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 MICU3Q86XE3 530 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 FANCBQ8NB91 859 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 AMNQ9BXJ7 453 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
MKS1-208ENST00000579358 FLRT1Q9NZU1 646 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 CYP46A1Q9Y6A2 500 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 NID2Q14112 1375 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 KLF18A0A0U1RQI7 1052 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 SEC24BO95487 1268 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 CCL5P13501 91 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
MKS1-208ENST00000579358 RXRAP19793 462 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 TRIM32Q13049 653 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 PPP2R5BQ15173 497 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 CLEC4DQ8WXI8 215 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 BRF1Q92994 677 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.65□□□□□ -0.54
MKS1-208ENST00000579358 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 UNC93B1Q9H1C4 597 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 VAT1LQ9HCJ6 419 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
MKS1-208ENST00000579358 PAK6Q9NQU5 681 aaPredicted RBP11.65□□□□□ -0.54
MKS1-208ENST00000579358 CYP39A1Q9NYL5 469 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 NRBP1Q9UHY1 535 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.54
MKS1-208ENST00000579358 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.55
MKS1-208ENST00000579358 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 PNMA6FA0A0J9YX94 578 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 GOLGA8AA7E2F4 631 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 GOLGA8BA8MQT2 603 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 NFIBO00712 420 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 PLEKHA8P1O95397 391 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 GJB1P08034 283 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 CYBAP13498 195 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 TAL1P17542 331 aaPredicted RBP11.64□□□□□ -0.55
MKS1-208ENST00000579358 SOX10P56693 466 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 EVCP57679 992 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
MKS1-208ENST00000579358 RTN1Q16799 776 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 USH1GQ495M9 461 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 MAMDC4Q6UXC1 1216 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 NSMFQ6X4W1 530 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 SAMD3Q8N6K7 520 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
MKS1-208ENST00000579358 PIGSQ96S52 555 aa11.64□□□□□ -0.55
MKS1-208ENST00000579358 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
MKS1-208ENST00000579358 MRPL11Q9Y3B7 192 aaKnown RBP11.64□□□□□ -0.55
MKS1-208ENST00000579358 LOC102724159A0A0B4J2E5 919 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 CCDC196A0A1B0GTZ2 297 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 CYP2C19P33261 490 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 GJA8P48165 433 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.55
MKS1-208ENST00000579358 GHRHRQ02643 423 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 PWP2Q15269 919 aaKnown RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 MCF2L2Q86YR7 1114 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 RAB11FIP4Q86YS3 637 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 CCDC144CPQ8IYA2 1237 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 FGD4Q96M96 766 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 TINF2Q9BSI4 451 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 PDRG1Q9NUG6 133 aa11.63□□□□□ -0.55
MKS1-208ENST00000579358 SEC63Q9UGP8 760 aaKnown RBP11.63□□□□□ -0.55
MKS1-208ENST00000579358 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 ASB14A6NK59 587 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 MSCO60682 206 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 CAPN15O75808 1086 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 RGS19P49795 217 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 RPS6P62753 249 aaKnown RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 CNTN2Q02246 1040 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 BAATQ14032 418 aaPredicted RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 SLC30A10Q6XR72 485 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 DNERQ8NFT8 737 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 U2AF1L4Q8WU68 220 aaKnown RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 FAM217BQ9NTX9 383 aaPredicted RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 ADD3Q9UEY8 706 aaKnown RBP11.62□□□□□ -0.55
MKS1-208ENST00000579358 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
MKS1-208ENST00000579358 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 SOWAHBA6NEL2 793 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 OPLAHO14841 1288 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 SGPL1O95470 568 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 PDIA3P30101 505 aaKnown RBP11.61□□□□□ -0.55
MKS1-208ENST00000579358 CDC27P30260 824 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 CCND3P30281 292 aaPredicted RBP11.61□□□□□ -0.55
MKS1-208ENST00000579358 FUT2Q10981 343 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms