RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 GPATCH4Q5T3I0 446 aaKnown RBP30.53■■■□□ 2.48
NPLOC4-215ENST00000574095 LCTP09848 1927 aa30.53■■■□□ 2.48
NPLOC4-215ENST00000574095 A0A1W2PPC1 479 aa30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 ASB14A6NK59 587 aa30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 NFIBO00712 420 aa30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 SGSM2O43147 1006 aa30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 DUSP11O75319 330 aaKnown RBP30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 MDM2Q00987 491 aaPredicted RBP30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 BAATQ14032 418 aaPredicted RBP30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 UBAC1Q9BSL1 405 aa30.52■■■□□ 2.48
NPLOC4-215ENST00000574095 IRX5P78411 483 aaPredicted RBP30.51■■■□□ 2.47
NPLOC4-215ENST00000574095 SNX17Q15036 470 aa30.51■■■□□ 2.47
NPLOC4-215ENST00000574095 TRIM60Q495X7 471 aa30.51■■■□□ 2.47
NPLOC4-215ENST00000574095 CYB5R4Q7L1T6 521 aa30.51■■■□□ 2.47
NPLOC4-215ENST00000574095 CYP21A2P08686 494 aa30.5■■■□□ 2.47
NPLOC4-215ENST00000574095 KLHDC9Q8NEP7 349 aa30.5■■■□□ 2.47
NPLOC4-215ENST00000574095 A0A1W2PQ45 241 aaPredicted RBP30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 A0A1W2PQY0 241 aa30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 PTPDC1A2A3K4 754 aa30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 MYADML2A6NDP7 307 aa30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 CLEC4DQ8WXI8 215 aa30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 TSEN34Q9BSV6 310 aaKnown RBP30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 UBE2OQ9C0C9 1292 aaKnown RBP30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 U3KPZ7 1027 aaPredicted RBP30.49■■■□□ 2.47
NPLOC4-215ENST00000574095 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 TRDNQ13061 729 aa30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 KCNA10Q16322 511 aa30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 IFIT1BQ5T764 474 aaKnown RBP30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 EEPD1Q7L9B9 569 aa30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 PRKAG2Q9UGJ0 569 aa30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 PNMA2Q9UL42 364 aa30.48■■■□□ 2.47
NPLOC4-215ENST00000574095 C6orf222P0C671 652 aaPredicted RBP30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 ACLYP53396 1101 aa30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 SEC23AQ15436 765 aa30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 C1orf53Q5VUE5 145 aa30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 CCSAPQ6IQ19 270 aaPredicted RBP30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 TAF6LQ9Y6J9 622 aa30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 WDR19Q8NEZ3 1342 aa30.47■■■□□ 2.47
NPLOC4-215ENST00000574095 PARP1P09874 1014 aaKnown RBP30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 CALML3P27482 149 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 TNFAIP2Q03169 654 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 USH1GQ495M9 461 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 ASPRV1Q53RT3 343 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 SLC30A10Q6XR72 485 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 SKAP1Q86WV1 359 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 ADGRF4Q8IZF3 695 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 SPC25Q9HBM1 224 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 PRDM5Q9NQX1 630 aaPredicted RBP30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 LRRC37A2A6NM11 1700 aa30.46■■■□□ 2.47
NPLOC4-215ENST00000574095 SOX1O00570 391 aaPredicted RBP30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 GJA9P57773 515 aa30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 TLE2Q04725 743 aa30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 CDC37Q16543 378 aaPredicted RBP30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 RNF207Q6ZRF8 634 aa30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 NOL8Q76FK4 1167 aaKnown RBP30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 MAP4K1Q92918 833 aa30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 LBHD1Q9BQE6 289 aaPredicted RBP30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 UPF3AQ9H1J1 476 aaKnown RBP30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 PDGFCQ9NRA1 345 aa30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 ADD3Q9UEY8 706 aaKnown RBP30.45■■■□□ 2.47
NPLOC4-215ENST00000574095 MOXD2PA6NHM9 499 aa30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 ALDH5A1P51649 535 aaPredicted RBP30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 FBXO16Q8IX29 292 aaPredicted RBP30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 TDHQ8IZJ6 230 aa30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 VAT1LQ9HCJ6 419 aa30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 STARD7Q9NQZ5 370 aa30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 SZT2Q5T011 3432 aa30.44■■■□□ 2.46
NPLOC4-215ENST00000574095 E7EWF7 191 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 CST5P28325 142 aaPredicted RBP30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 GNASQ5JWF2 1037 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 TAPT1Q6NXT6 567 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 SH3RF1Q7Z6J0 888 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 STAG2Q8N3U4 1231 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 MORC4Q8TE76 937 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 NUP133Q8WUM0 1156 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 PDLIM7Q9NR12 457 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 MYH6P13533 1939 aa30.43■■■□□ 2.46
NPLOC4-215ENST00000574095 DHX16O60231 1041 aaKnown RBP30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 ASGR1P07306 291 aa30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 PTGS1P23219 599 aa30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 RPS6P62753 249 aaKnown RBP30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 STOX1Q6ZVD7 989 aa30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 CENPQQ7L2Z9 268 aaPredicted RBP30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 PCSK9Q8NBP7 692 aaKnown RBP30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 GNEQ9Y223 722 aaKnown RBP30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 RBM8AQ9Y5S9 174 aaKnown RBP30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 LTBP2Q14767 1821 aa30.42■■■□□ 2.46
NPLOC4-215ENST00000574095 CTAGE5O15320 804 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 SMPD1P17405 629 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 BEX3Q00994 111 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 TMEM63BQ5T3F8 832 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 CHST3Q7LGC8 479 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 RALYLQ86SE5 291 aaKnown RBP30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 NCOA7Q8NI08 942 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 LRCH3Q96II8 777 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 JMJD4Q9H9V9 463 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 VTA1Q9NP79 307 aa30.41■■■□□ 2.46
NPLOC4-215ENST00000574095 TRIM43BA6NCK2 446 aa30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 IFIT3O14879 490 aaKnown RBP30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 PQBP1O60828 265 aaKnown RBP30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms