RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ZSWIM6Q9HCJ5 1215 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 RNF146Q9NTX7 359 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 PNMA2Q9UL42 364 aa15.76■□□□□ 0.11
RPAIN-213ENST00000573577 DIS3Q9Y2L1 958 aaKnown RBP15.76■□□□□ 0.11
RPAIN-213ENST00000573577 DNAJC25-GNG10A0A024R161 153 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 FARP2O94887 1054 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-213ENST00000573577 ICAM1P05362 532 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 GOLGA8HP0CJ92 632 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 CYBAP13498 195 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 GRM4Q14833 912 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 ANKRD35Q8N283 1001 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 FBXL16Q8N461 479 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 TCEANC2Q96MN5 208 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 GPHNQ9NQX3 736 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-213ENST00000573577 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
RPAIN-213ENST00000573577 ALAS1P13196 640 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 GNAQP50148 359 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 COL9A3Q14050 684 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-213ENST00000573577 Q6ZUG5 572 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 TRPV1Q8NER1 839 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 IL17RAQ96F46 866 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 MAD2L2Q9UI95 211 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 OGDHLQ9ULD0 1010 aa15.74■□□□□ 0.11
RPAIN-213ENST00000573577 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
RPAIN-213ENST00000573577 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 DHX16O60231 1041 aaKnown RBP15.73■□□□□ 0.11
RPAIN-213ENST00000573577 CPA1P15085 419 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 CNGA1P29973 690 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 RCAN1P53805 252 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 LHX8Q68G74 356 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 ANKLE1Q8NAG6 615 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 TINF2Q9BSI4 451 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 UBA5Q9GZZ9 404 aa15.73■□□□□ 0.11
RPAIN-213ENST00000573577 A1CFQ9NQ94 594 aaKnown RBP15.73■□□□□ 0.11
RPAIN-213ENST00000573577 DDX20Q9UHI6 824 aaKnown RBP15.73■□□□□ 0.11
RPAIN-213ENST00000573577 PFASO15067 1338 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 ZBTB43O43298 467 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 MSCO60682 206 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 TAL1P17542 331 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-213ENST00000573577 MUM1L1Q5H9M0 696 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 APOA5Q6Q788 366 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 ZNF467Q7Z7K2 595 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-213ENST00000573577 MICU3Q86XE3 530 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 STAG2Q8N3U4 1231 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 MSL3Q8N5Y2 521 aaKnown RBP15.72■□□□□ 0.11
RPAIN-213ENST00000573577 BRF1Q92994 677 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 MYL10Q9BUA6 226 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 C22orf23Q9BZE7 217 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
RPAIN-213ENST00000573577 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 PDRG1Q9NUG6 133 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
RPAIN-213ENST00000573577 NRBP1Q9UHY1 535 aa15.72■□□□□ 0.11
RPAIN-213ENST00000573577 SYNGAP1Q96PV0 1343 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 ZNFX1Q9P2E3 1918 aaKnown RBP15.71■□□□□ 0.11
RPAIN-213ENST00000573577 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 SEPT4O43236 478 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 SMARCA1P28370 1054 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 PPP2R5BQ15173 497 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 MAMDC4Q6UXC1 1216 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 ADGRF4Q8IZF3 695 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 NAP1L2Q9ULW6 460 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-213ENST00000573577 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 PLXNA1Q9UIW2 1896 aa15.71■□□□□ 0.11
RPAIN-213ENST00000573577 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
RPAIN-213ENST00000573577 MNX1P50219 401 aaPredicted RBP15.7■□□□□ 0.1
RPAIN-213ENST00000573577 CNTN2Q02246 1040 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 TRAF1Q13077 416 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 CDC37Q16543 378 aaPredicted RBP15.7■□□□□ 0.1
RPAIN-213ENST00000573577 PRAMEF19Q5SWL8 479 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 FAM133AQ8N9E0 248 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 DIS3LQ8TF46 1054 aaKnown RBP15.7■□□□□ 0.1
RPAIN-213ENST00000573577 PAWRQ96IZ0 340 aaKnown RBP15.7■□□□□ 0.1
RPAIN-213ENST00000573577 FGD4Q96M96 766 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 CNPY2Q9Y2B0 182 aa15.7■□□□□ 0.1
RPAIN-213ENST00000573577 GOLGA8AA7E2F4 631 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 GOLGA8BA8MQT2 603 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 NFIBO00712 420 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 RXRAP19793 462 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
RPAIN-213ENST00000573577 APOBRQ0VD83 1088 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 RTN1Q16799 776 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 NECAB2Q7Z6G3 386 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 CCDC144CPQ8IYA2 1237 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 HTATIP2Q9BUP3 242 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 SPZ1Q9BXG8 430 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-213ENST00000573577 RIOX1Q9H6W3 641 aa15.69■□□□□ 0.1
RPAIN-213ENST00000573577 JMJD4Q9H9V9 463 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms