RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CDC37Q16543 378 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 USH1GQ495M9 461 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 ERICH6BQ5W0A0 696 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 NSMFQ6X4W1 530 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 DPF3Q92784 378 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 MYL10Q9BUA6 226 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 KATNBL1Q9H079 304 aa11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-213ENST00000571886 KLRF2D3W0D1 207 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 SH2B2O14492 632 aaPredicted RBP11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 CYTH3O43739 400 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 PPP1R11O60927 126 aaPredicted RBP11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 COL6A1P12109 1028 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 PTGS1P23219 599 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 QRICH1Q2TAL8 776 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 SLC30A10Q6XR72 485 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 ARMCX2Q7L311 632 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 MTMR8Q96EF0 704 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 C11orf49Q9H6J7 331 aa11.95□□□□□ -0.5
GTF3C1-213ENST00000571886 WDR19Q8NEZ3 1342 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 ERICH2A1L162 156 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 H0YGN5 161 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 PGK1P00558 417 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 CPA1P15085 419 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 RXRAP19793 462 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 MCM5P33992 734 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 EXOSC10Q01780 885 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 ACVR2BQ13705 512 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 TSGA10IPQ3SY00 556 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 TMEM63BQ5T3F8 832 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 NUP133Q8WUM0 1156 aa11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
GTF3C1-213ENST00000571886 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 DHX16O60231 1041 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 MSCO60682 206 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 CALML3P27482 149 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 RPS6P62753 249 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 LRRC41Q15345 812 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 CCDC144BQ3MJ40 725 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 RNF207Q6ZRF8 634 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 KCNB2Q92953 911 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 PIGSQ96S52 555 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 HTATIP2Q9BUP3 242 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 RIOX1Q9H6W3 641 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 PDGFCQ9NRA1 345 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 COL20A1Q9P218 1284 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 NRBP1Q9UHY1 535 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 CNPY2Q9Y2B0 182 aa11.93□□□□□ -0.5
GTF3C1-213ENST00000571886 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 MYADML2A6NDP7 307 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 OPLAHO14841 1288 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 AKR1A1P14550 325 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 HSPA4P34932 840 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 ALDH5A1P51649 535 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 CATIPQ7Z7H3 387 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 FBXO11Q86XK2 927 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 MORC4Q8TE76 937 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 PIBF1Q8WXW3 757 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 TMEM87BQ96K49 555 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 MTA3Q9BTC8 594 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 ABHD16BQ9H3Z7 469 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 SNX14Q9Y5W7 946 aa11.92□□□□□ -0.5
GTF3C1-213ENST00000571886 DNM1LO00429 736 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 ADAMTS4O75173 837 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 RARBP10826 455 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 LIFRP42702 1097 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 ATN1P54259 1190 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 TAPT1Q6NXT6 567 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 NFXL1Q6ZNB6 911 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 FBXO16Q8IX29 292 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 SRBD1Q8N5C6 995 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 TAAR1Q96RJ0 339 aa11.91□□□□□ -0.5
GTF3C1-213ENST00000571886 XPNPEP3Q9NQH7 507 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms