RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 TRMT44Q8IYL2 757 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 ANKRD35Q8N283 1001 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 FAM133AQ8N9E0 248 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 TRPV1Q8NER1 839 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 IL17RAQ96F46 866 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 PIGSQ96S52 555 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 RNF208Q9H0X6 261 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 BAZ2BQ9UIF8 2168 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-203ENST00000571739 RPTORQ8N122 1335 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 KLF18A0A0U1RQI7 1052 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 ZBTB5O15062 677 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 DHX16O60231 1041 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 SNAI1O95863 264 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 GJB1P08034 283 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CALM1P0DP23 149 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CALM2P0DP24 149 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CALM3P0DP25 149 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 PRKAR2AP13861 404 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CDC27P30260 824 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CCND3P30281 292 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 RGS19P49795 217 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 EVCP57679 992 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 BAATQ14032 418 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 USH1GQ495M9 461 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 BRF1Q92994 677 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 UPF3BQ9BZI7 483 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 PAK6Q9NQU5 681 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 SLC5A4Q9NY91 659 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 CYP39A1Q9NYL5 469 aa10.11□□□□□ -0.79
TRAPPC1-203ENST00000571739 ASTN1O14525 1302 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 PNMA6FA0A0J9YX94 578 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 OPLAHO14841 1288 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 ZBTB43O43298 467 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 SGPL1O95470 568 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 KIF5BP33176 963 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 ADD1P35611 737 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 ANAPC15P60006 121 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 FUT2Q10981 343 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 MFSD14CQ5VZR4 134 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 LHX8Q68G74 356 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 MAMDC4Q6UXC1 1216 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 NSMFQ6X4W1 530 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 CCDC82Q8N4S0 544 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 RGS22Q8NE09 1264 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 DEFB118Q96PH6 123 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 SPZ1Q9BXG8 430 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 PNMA2Q9UL42 364 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 CYP46A1Q9Y6A2 500 aa10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 DDX49Q9Y6V7 483 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-203ENST00000571739 hCG_1642624A0A1W2PR95 340 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 POTEB2H3BUK9 544 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 CYBAP13498 195 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 PDIA3P30101 505 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 GJA8P48165 433 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 GNAQP50148 359 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 RPS6P62753 249 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 SLC30A10Q6XR72 485 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 TMTC3Q6ZXV5 915 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 ZNF467Q7Z7K2 595 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 U2AF1L4Q8WU68 220 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 SHISA4Q96DD7 197 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 KIF2CQ99661 725 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 PDRG1Q9NUG6 133 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 COL20A1Q9P218 1284 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 ZNF236Q9UL36 1845 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 HTTP42858 3142 aa10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 KIAA0100Q14667 2235 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-203ENST00000571739 ABCB11O95342 1321 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 PTPDC1A2A3K4 754 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 RCAN1P53805 252 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 FGD1P98174 961 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 NTRK3Q16288 839 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 RTN1Q16799 776 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 MSL3Q8N5Y2 521 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 TAAR1Q96RJ0 339 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 KATNBL1Q9H079 304 aa10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 ALDH8A1Q9H2A2 487 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 MRPL11Q9Y3B7 192 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-203ENST00000571739 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms