RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 IL17RAQ96F46 866 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 DHTKD1Q96HY7 919 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 IRX2Q9BZI1 471 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 XRN1Q8IZH2 1706 aaKnown RBP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 SEMA3EO15041 775 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 METTL16Q86W50 562 aaKnown RBP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 MRFAP1Q9Y605 127 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 CTDNEP1O95476 244 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 CTNNA1P35221 906 aaKnown RBP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 MTF1Q14872 753 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 P2RX5Q93086 422 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 ZBTB1Q9Y2K1 713 aa12.3□□□□□ -0.44
PCDHGA4-201ENST00000571252 TCHHQ07283 1943 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 ANKRD65E5RJM6 399 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 NEBLO76041 1014 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 ZBED6P86452 979 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 RASSF7Q02833 373 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 PLS1Q14651 629 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 FMNL3Q8IVF7 1028 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 MTMR3Q13615 1198 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 PTPROQ16827 1216 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 RBM43Q6ZSC3 357 aaKnown RBP12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 UBN2Q6ZU65 1347 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 CXCR5P32302 372 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 POLR2FP61218 127 aaKnown RBP12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 SCARF1Q14162 830 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 SEC31BQ9NQW1 1179 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 NEDD4P46934 1319 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 STK36Q9NRP7 1315 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 EHHADHQ08426 723 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 C2orf54Q08AI8 447 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
PCDHGA4-201ENST00000571252 SPOPO43791 374 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 FDPSP14324 419 aaKnown RBP12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 EPHB4P54760 987 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 DYNLL1P63167 89 aaKnown RBP12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 CCDC170Q8IYT3 715 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 DDX12PQ92771 950 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 ABHD10Q9NUJ1 306 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 GJC1P36383 396 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 NAA25Q14CX7 972 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 USP37Q86T82 979 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 EFCAB13Q8IY85 973 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 PIGBQ92521 554 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 JRKLQ9Y4A0 524 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 CYP2D7A0A087X1C5 515 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 CCDC6Q16204 474 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 HLFQ16534 295 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 EYA3Q99504 573 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 CUEDC2Q9H467 287 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
PCDHGA4-201ENST00000571252 SYCE1Q8N0S2 351 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 MAGEF1Q9HAY2 307 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 TUBE1Q9UJT0 475 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 A0A1B0GUA9 196 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 SNAP23O00161 211 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 CALUO43852 315 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 GNA14O95837 355 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 CCNE1P24864 410 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 CYP2C19P33261 490 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 GSTA5Q7RTV2 222 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 NT5C3AQ9H0P0 336 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 DNM3Q9UQ16 869 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.44
PCDHGA4-201ENST00000571252 KRIT1O00522 736 aa12.27□□□□□ -0.45
PCDHGA4-201ENST00000571252 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
PCDHGA4-201ENST00000571252 MAP2K2P36507 400 aa12.27□□□□□ -0.45
PCDHGA4-201ENST00000571252 APBA1Q02410 837 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms