RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CCDC144BQ3MJ40 725 aa16.91■□□□□ 0.3
CMTM3-215ENST00000568477 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
CMTM3-215ENST00000568477 PRKAG2Q9UGJ0 569 aa16.91■□□□□ 0.3
CMTM3-215ENST00000568477 U3KPZ7 1027 aaPredicted RBP16.91■□□□□ 0.3
CMTM3-215ENST00000568477 WDR19Q8NEZ3 1342 aa16.91■□□□□ 0.3
CMTM3-215ENST00000568477 SGSM2O43147 1006 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 PTH1RQ03431 593 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 TRDNQ13061 729 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 SNX17Q15036 470 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 TRIM60Q495X7 471 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
CMTM3-215ENST00000568477 KATNBL1Q9H079 304 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 SPC25Q9HBM1 224 aa16.9■□□□□ 0.3
CMTM3-215ENST00000568477 A0A1W2PQ45 241 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-215ENST00000568477 A0A1W2PQY0 241 aa16.89■□□□□ 0.29
CMTM3-215ENST00000568477 NFIBO00712 420 aa16.89■□□□□ 0.29
CMTM3-215ENST00000568477 BAATQ14032 418 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-215ENST00000568477 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
CMTM3-215ENST00000568477 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
CMTM3-215ENST00000568477 KLHDC9Q8NEP7 349 aa16.89■□□□□ 0.29
CMTM3-215ENST00000568477 LBHD1Q9BQE6 289 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-215ENST00000568477 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
CMTM3-215ENST00000568477 ADD3Q9UEY8 706 aaKnown RBP16.89■□□□□ 0.29
CMTM3-215ENST00000568477 ASTN1O14525 1302 aa16.89■□□□□ 0.29
CMTM3-215ENST00000568477 PTPDC1A2A3K4 754 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 ADCY6O43306 1168 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 CYP21A2P08686 494 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
CMTM3-215ENST00000568477 C6orf222P0C671 652 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-215ENST00000568477 CST5P28325 142 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-215ENST00000568477 ACLYP53396 1101 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 MDM2Q00987 491 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-215ENST00000568477 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
CMTM3-215ENST00000568477 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 DNAH12Q6ZR08 3092 aa16.88■□□□□ 0.29
CMTM3-215ENST00000568477 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 DHX16O60231 1041 aaKnown RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 GJA9P57773 515 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 TNFAIP2Q03169 654 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 TLE2Q04725 743 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 KCNA10Q16322 511 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 CDC37Q16543 378 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 SLC30A10Q6XR72 485 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 RNF207Q6ZRF8 634 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 PCSK9Q8NBP7 692 aaKnown RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 PURBQ96QR8 312 aaKnown RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 PRDM5Q9NQX1 630 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
CMTM3-215ENST00000568477 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
CMTM3-215ENST00000568477 LOC102724159A0A0B4J2E5 919 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 CALML3P27482 149 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-215ENST00000568477 PWP2Q15269 919 aaKnown RBP16.86■□□□□ 0.29
CMTM3-215ENST00000568477 SEC23AQ15436 765 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 USH1GQ495M9 461 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-215ENST00000568477 EEPD1Q7L9B9 569 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 FBXO16Q8IX29 292 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-215ENST00000568477 ADGRF4Q8IZF3 695 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 TDHQ8IZJ6 230 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 MORC4Q8TE76 937 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 PDLIM7Q9NR12 457 aa16.86■□□□□ 0.29
CMTM3-215ENST00000568477 LRRC37A2A6NM11 1700 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-215ENST00000568477 ERICH2A1L162 156 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 E7EWF7 191 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 RPS6P62753 249 aaKnown RBP16.85■□□□□ 0.29
CMTM3-215ENST00000568477 GNASQ5JWF2 1037 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 MPHOSPH6Q99547 160 aaKnown RBP16.85■□□□□ 0.29
CMTM3-215ENST00000568477 RBM8AQ9Y5S9 174 aaKnown RBP16.85■□□□□ 0.29
CMTM3-215ENST00000568477 LCTP09848 1927 aa16.85■□□□□ 0.29
CMTM3-215ENST00000568477 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
CMTM3-215ENST00000568477 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
CMTM3-215ENST00000568477 PQBP1O60828 265 aaKnown RBP16.84■□□□□ 0.29
CMTM3-215ENST00000568477 ASGR1P07306 291 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 NKX3-2P78367 333 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
CMTM3-215ENST00000568477 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
CMTM3-215ENST00000568477 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 TAPT1Q6NXT6 567 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 TLK2Q86UE8 772 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 AP5M1Q9H0R1 490 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
CMTM3-215ENST00000568477 PDGFCQ9NRA1 345 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms