RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 NSUN3Q9H649 340 aaKnown RBP11.81□□□□□ -0.52
CAPN3-216ENST00000567071 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
CAPN3-216ENST00000567071 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 IL16Q14005 1332 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 VPS13AQ96RL7 3174 aa11.81□□□□□ -0.52
CAPN3-216ENST00000567071 PTPRSQ13332 1948 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 ADCY6O43306 1168 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 USP5P45974 858 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 WDR5P61964 334 aaKnown RBP11.8□□□□□ -0.52
CAPN3-216ENST00000567071 TIMM10P62072 90 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 BFSP2Q13515 415 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 PUM1Q14671 1186 aaKnown RBP eCLIP11.8□□□□□ -0.52
CAPN3-216ENST00000567071 SEPT2Q15019 361 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 TCEAL5Q5H9L2 206 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 TLK2Q86UE8 772 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 SAMD11Q96NU1 681 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 GRIN2DO15399 1336 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 MAP1BP46821 2468 aaKnown RBP11.8□□□□□ -0.52
CAPN3-216ENST00000567071 TET1Q8NFU7 2136 aa11.8□□□□□ -0.52
CAPN3-216ENST00000567071 DMXL1Q9Y485 3027 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 PARP14Q460N5 1801 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 WDR46O15213 610 aaKnown RBP11.79□□□□□ -0.52
CAPN3-216ENST00000567071 CTAGE5O15320 804 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 MBTPS2O43462 519 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 GJB5O95377 273 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 IQCF3P0C7M6 154 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 PSMC6P62333 389 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 SMAD4Q13485 552 aaKnown RBP11.79□□□□□ -0.52
CAPN3-216ENST00000567071 CLUL1Q15846 466 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 ST3GAL2Q16842 350 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 LRRFIP1Q32MZ4 808 aaKnown RBP11.79□□□□□ -0.52
CAPN3-216ENST00000567071 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 RMDN1Q96DB5 314 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 TRMT13Q9NUP7 481 aaKnown RBP11.79□□□□□ -0.52
CAPN3-216ENST00000567071 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
CAPN3-216ENST00000567071 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 EFCAB14O75071 495 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 ARMCX2Q7L311 632 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 FRMD5Q7Z6J6 570 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 SPICE1Q8N0Z3 855 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 MYO7AQ13402 2215 aa11.78□□□□□ -0.52
CAPN3-216ENST00000567071 CEP250Q9BV73 2442 aa11.77□□□□□ -0.52
CAPN3-216ENST00000567071 A0A1W2PRG0 241 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 DYNC1LI2O43237 492 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-216ENST00000567071 MCAMP43121 646 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 COL9A2Q14055 689 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-216ENST00000567071 COL19A1Q14993 1142 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 FAM47CQ5HY64 1035 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 PI16Q6UXB8 463 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 TMCO2Q7Z6W1 182 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-216ENST00000567071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.77□□□□□ -0.53
CAPN3-216ENST00000567071 C17orf80Q9BSJ5 609 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 TEX13BQ9BXU2 312 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 INSL6Q9Y581 213 aa11.77□□□□□ -0.53
CAPN3-216ENST00000567071 CTDP1Q9Y5B0 961 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-216ENST00000567071 SPTBN2O15020 2390 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 DNAJC25-GNG10A0A024R161 153 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 VWA5AO00534 786 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 SHMT1P34896 483 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 DEFB103AP81534 67 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
CAPN3-216ENST00000567071 GPM6BQ13491 265 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
CAPN3-216ENST00000567071 FAM117BQ6P1L5 589 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 CNKSR3Q6P9H4 555 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 ANKRD35Q8N283 1001 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-216ENST00000567071 CD207Q9UJ71 328 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 ZNF214Q9UL59 606 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-216ENST00000567071 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 ZFHX4Q86UP3 3567 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 DMDP11532 3685 aa11.76□□□□□ -0.53
CAPN3-216ENST00000567071 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-216ENST00000567071 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 PARNO95453 639 aaKnown RBP11.75□□□□□ -0.53
CAPN3-216ENST00000567071 CENPBP07199 599 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-216ENST00000567071 UQCRFS1P1P0C7P4 283 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 TMEM179Q6ZVK1 233 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 CCDC144CPQ8IYA2 1237 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 PPP1R9AQ9ULJ8 1098 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 ASTN1O14525 1302 aa11.75□□□□□ -0.53
CAPN3-216ENST00000567071 TRIP12Q14669 1992 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-216ENST00000567071 FASNP49327 2511 aaKnown RBP11.74□□□□□ -0.53
CAPN3-216ENST00000567071 H3BNC9 293 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 IGSF3O75054 1194 aa11.74□□□□□ -0.53
CAPN3-216ENST00000567071 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms