RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 RXRAP19793 462 aa24.46■■□□□ 1.51
SHCBP1-205ENST00000566016 ANKRD35Q8N283 1001 aa24.46■■□□□ 1.51
SHCBP1-205ENST00000566016 NPLOC4Q8TAT6 608 aa24.46■■□□□ 1.51
SHCBP1-205ENST00000566016 DDX11Q96FC9 970 aa24.46■■□□□ 1.51
SHCBP1-205ENST00000566016 A1CFQ9NQ94 594 aaKnown RBP24.46■■□□□ 1.51
SHCBP1-205ENST00000566016 MCM3APO60318 1980 aa24.46■■□□□ 1.51
SHCBP1-205ENST00000566016 ABCB11O95342 1321 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 TRAF1Q13077 416 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 CCL14Q16627 93 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 ZNF792Q3KQV3 632 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 MUM1L1Q5H9M0 696 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 MAP3K21Q5TCX8 1036 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 TMTC3Q6ZXV5 915 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 FBXO11Q86XK2 927 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 VAT1LQ9HCJ6 419 aa24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 BIN2Q9UBW5 565 aaPredicted RBP24.45■■□□□ 1.51
SHCBP1-205ENST00000566016 TOB2Q14106 344 aaPredicted RBP24.45■■□□□ 1.5
SHCBP1-205ENST00000566016 RTN1Q16799 776 aa24.45■■□□□ 1.5
SHCBP1-205ENST00000566016 MAML3Q96JK9 1138 aa24.45■■□□□ 1.5
SHCBP1-205ENST00000566016 AMNQ9BXJ7 453 aa24.45■■□□□ 1.5
SHCBP1-205ENST00000566016 PNMA6FA0A0J9YX94 578 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 GOLGA8BA8MQT2 603 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 PLEKHA8P1O95397 391 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 PGK2P07205 417 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 APOBRQ0VD83 1088 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 ZNF467Q7Z7K2 595 aaPredicted RBP24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 CCDC144CPQ8IYA2 1237 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 SRBD1Q8N5C6 995 aaKnown RBP24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 MSL3Q8N5Y2 521 aaKnown RBP24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 RGS22Q8NE09 1264 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 CLEC4DQ8WXI8 215 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 ALDH8A1Q9H2A2 487 aaPredicted RBP24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 CYP39A1Q9NYL5 469 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 FLRT1Q9NZU1 646 aa24.44■■□□□ 1.5
SHCBP1-205ENST00000566016 CCDC196A0A1B0GTZ2 297 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 GOLGA8AA7E2F4 631 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 NFIBO00712 420 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 USH1GQ495M9 461 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 MFSD14CQ5VZR4 134 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 PIGSQ96S52 555 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 PDRG1Q9NUG6 133 aa24.43■■□□□ 1.5
SHCBP1-205ENST00000566016 PPP1R11O60927 126 aaPredicted RBP24.42■■□□□ 1.5
SHCBP1-205ENST00000566016 TAL1P17542 331 aaPredicted RBP24.42■■□□□ 1.5
SHCBP1-205ENST00000566016 HOMER1Q86YM7 354 aa24.42■■□□□ 1.5
SHCBP1-205ENST00000566016 RAB11FIP4Q86YS3 637 aa24.42■■□□□ 1.5
SHCBP1-205ENST00000566016 FAM133AQ8N9E0 248 aa24.42■■□□□ 1.5
SHCBP1-205ENST00000566016 RRP36Q96EU6 259 aaKnown RBP24.42■■□□□ 1.5
SHCBP1-205ENST00000566016 CCDC85CA6NKD9 419 aa24.41■■□□□ 1.5
SHCBP1-205ENST00000566016 RBM25P49756 843 aaKnown RBP24.41■■□□□ 1.5
SHCBP1-205ENST00000566016 METAP2P50579 478 aaKnown RBP eCLIP24.41■■□□□ 1.5
SHCBP1-205ENST00000566016 MRPL11Q9Y3B7 192 aaKnown RBP24.41■■□□□ 1.5
SHCBP1-205ENST00000566016 RPTORQ8N122 1335 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 POTEB2H3BUK9 544 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 PRKAR2AP13861 404 aaKnown RBP24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 MAMDC4Q6UXC1 1216 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 NSMFQ6X4W1 530 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 UPF2Q9HAU5 1272 aaKnown RBP24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 FAM217BQ9NTX9 383 aaPredicted RBP24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 SEC63Q9UGP8 760 aaKnown RBP24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 PCDHA1Q9Y5I3 950 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 FRMPD3Q5JV73 1810 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 CNTNAP5Q8WYK1 1306 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 SYNGAP1Q96PV0 1343 aa24.4■■□□□ 1.5
SHCBP1-205ENST00000566016 CCL5P13501 91 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 GHRHRQ02643 423 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 FUT2Q10981 343 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 ANKRD1Q15327 319 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 MTFR1Q15390 333 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 MCF2L2Q86YR7 1114 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 ZNF274Q96GC6 653 aaPredicted RBP24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 FGD4Q96M96 766 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 TINF2Q9BSI4 451 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 C22orf23Q9BZE7 217 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 PAK6Q9NQU5 681 aaPredicted RBP24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 NRBP1Q9UHY1 535 aa24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 NAP1L2Q9ULW6 460 aaPredicted RBP24.39■■□□□ 1.5
SHCBP1-205ENST00000566016 LRRC37A2A6NM11 1700 aa24.39■■□□□ 1.49
SHCBP1-205ENST00000566016 LOC102724159A0A0B4J2E5 919 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 PDIA3P30101 505 aaKnown RBP24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 CACNB2Q08289 660 aaPredicted RBP24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 TRIM32Q13049 653 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 PWP2Q15269 919 aaKnown RBP24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 RNF207Q6ZRF8 634 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 SAMD3Q8N6K7 520 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 HMX1Q9NP08 348 aaPredicted RBP24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 CDC27P30260 824 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 CYP2C19P33261 490 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 BAATQ14032 418 aaPredicted RBP24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 CMTR1Q8N1G2 835 aaKnown RBP24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 TMEM106CQ9BVX2 250 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 RNF208Q9H0X6 261 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 UNC93B1Q9H1C4 597 aa24.38■■□□□ 1.49
SHCBP1-205ENST00000566016 GJB1P08034 283 aa24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 CYBAP13498 195 aa24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 CAPN2P17655 700 aa24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 RPS6P62753 249 aaKnown RBP24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 CNTN2Q02246 1040 aa24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 MAP3K20Q9NYL2 800 aaKnown RBP24.37■■□□□ 1.49
SHCBP1-205ENST00000566016 PTPDC1A2A3K4 754 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms