RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 NECTIN1Q15223 517 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 CDC37Q16543 378 aaPredicted RBP21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 TMEM67Q5HYA8 995 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 GJC2Q5T442 439 aaPredicted RBP21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 RNF20Q5VTR2 975 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 CREB3L3Q68CJ9 461 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 ARMCX2Q7L311 632 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 CCDC144CPQ8IYA2 1237 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 MB21D2Q8IYB1 491 aaPredicted RBP21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 FGD4Q96M96 766 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 SENP6Q9GZR1 1112 aaPredicted RBP21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 VAT1LQ9HCJ6 419 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 FAM184BQ9ULE4 1060 aa21.41■■□□□ 1.02
SYNGR3-204ENST00000564642 ALPK3Q96L96 1907 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 PTPDC1A2A3K4 754 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 SOWAHBA6NEL2 793 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 BAATQ14032 418 aaPredicted RBP21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 USH1GQ495M9 461 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 ERICH6BQ5W0A0 696 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 XPNPEP3Q9NQH7 507 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 PPP4R2Q9NY27 417 aa21.4■■□□□ 1.02
SYNGR3-204ENST00000564642 KLRF2D3W0D1 207 aa21.39■■□□□ 1.01
SYNGR3-204ENST00000564642 NFIBO00712 420 aa21.39■■□□□ 1.01
SYNGR3-204ENST00000564642 MCM5P33992 734 aa21.39■■□□□ 1.01
SYNGR3-204ENST00000564642 CATIPQ7Z7H3 387 aa21.39■■□□□ 1.01
SYNGR3-204ENST00000564642 STAG2Q8N3U4 1231 aa21.39■■□□□ 1.01
SYNGR3-204ENST00000564642 IGDCC4Q8TDY8 1250 aa21.39■■□□□ 1.01
SYNGR3-204ENST00000564642 ANTXR2P58335 489 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 LRRC41Q15345 812 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 RNF207Q6ZRF8 634 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 C7orf61Q8IZ16 206 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 CLEC4DQ8WXI8 215 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 MTA3Q9BTC8 594 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 SENP2Q9HC62 589 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 ADD3Q9UEY8 706 aaKnown RBP21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 MAD2L2Q9UI95 211 aa21.38■■□□□ 1.01
SYNGR3-204ENST00000564642 ABCB11O95342 1321 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 PALM3A6NDB9 673 aaPredicted RBP21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 PRC1O43663 620 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 PGK1P00558 417 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 CALML3P27482 149 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 QRICH1Q2TAL8 776 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 RNF180Q86T96 592 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 FBXO11Q86XK2 927 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 JMJD4Q9H9V9 463 aa21.37■■□□□ 1.01
SYNGR3-204ENST00000564642 GRM4Q14833 912 aa21.36■■□□□ 1.01
SYNGR3-204ENST00000564642 CCDC144BQ3MJ40 725 aa21.36■■□□□ 1.01
SYNGR3-204ENST00000564642 TMTC2Q8N394 836 aa21.36■■□□□ 1.01
SYNGR3-204ENST00000564642 TMEM87BQ96K49 555 aa21.36■■□□□ 1.01
SYNGR3-204ENST00000564642 PURBQ96QR8 312 aaKnown RBP21.36■■□□□ 1.01
SYNGR3-204ENST00000564642 LCTP09848 1927 aa21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 DUSP11O75319 330 aaKnown RBP21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 LRRC26Q2I0M4 334 aa21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 NFXL1Q6ZNB6 911 aa21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 SLC17A8Q8NDX2 589 aa21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 NUP133Q8WUM0 1156 aa21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 LENG1Q96BZ8 264 aaPredicted RBP21.35■■□□□ 1.01
SYNGR3-204ENST00000564642 ADCYAP1R1P41586 468 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 ALDH5A1P51649 535 aaPredicted RBP21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 ATN1P54259 1190 aaPredicted RBP21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 RPS6P62753 249 aaKnown RBP21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 TROAPQ12815 778 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 SLC30A10Q6XR72 485 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 MCF2L2Q86YR7 1114 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 MPHOSPH6Q99547 160 aaKnown RBP21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 AMNQ9BXJ7 453 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 LY9Q9HBG7 655 aa21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 MRPL11Q9Y3B7 192 aaKnown RBP21.34■■□□□ 1.01
SYNGR3-204ENST00000564642 ASTN1O14525 1302 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 LOC102724159A0A0B4J2E5 919 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 PWP2Q15269 919 aaKnown RBP21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 NOL8Q76FK4 1167 aaKnown RBP21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 EEPD1Q7L9B9 569 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 ZNF654Q8IZM8 581 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 MAF1Q9H063 256 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 KATNBL1Q9H079 304 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 SPC25Q9HBM1 224 aa21.33■■□□□ 1.01
SYNGR3-204ENST00000564642 SYNRGQ9UMZ2 1314 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 B4DLN1 442 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 ZBTB5O15062 677 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 MRPL12P52815 198 aaKnown RBP21.32■■□□□ 1
SYNGR3-204ENST00000564642 TNFAIP2Q03169 654 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 SLC39A5Q6ZMH5 540 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 HOMER1Q86YM7 354 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 DNERQ8NFT8 737 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 CTCFLQ8NI51 663 aaPredicted RBP21.32■■□□□ 1
SYNGR3-204ENST00000564642 MORC4Q8TE76 937 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 FERMT2Q96AC1 680 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 MTMR8Q96EF0 704 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 NEK1Q96PY6 1258 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 MAP3K14Q99558 947 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 RIOX1Q9H6W3 641 aa21.32■■□□□ 1
SYNGR3-204ENST00000564642 GPHNQ9NQX3 736 aaPredicted RBP21.32■■□□□ 1
SYNGR3-204ENST00000564642 DDX49Q9Y6V7 483 aaKnown RBP21.32■■□□□ 1
SYNGR3-204ENST00000564642 SH2B2O14492 632 aaPredicted RBP21.31■■□□□ 1
SYNGR3-204ENST00000564642 ADAMTS4O75173 837 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 DDAH1O94760 285 aa21.31■■□□□ 1
SYNGR3-204ENST00000564642 C6orf222P0C671 652 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms