RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ADAMTS4O75173 837 aa23.39■■□□□ 1.33
SHCBP1-203ENST00000564272 RNF180Q86T96 592 aa23.39■■□□□ 1.33
SHCBP1-203ENST00000564272 KATNBL1Q9H079 304 aa23.39■■□□□ 1.33
SHCBP1-203ENST00000564272 PHF24Q9UPV7 400 aa23.39■■□□□ 1.33
SHCBP1-203ENST00000564272 MAGEA10P43363 369 aaPredicted RBP23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 SEC23AQ15436 765 aa23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 CCDC144BQ3MJ40 725 aa23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 IFIT1BQ5T764 474 aaKnown RBP23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 SLC39A5Q6ZMH5 540 aa23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 GDF15Q99988 308 aa23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 ATP11BQ9Y2G3 1177 aa23.38■■□□□ 1.33
SHCBP1-203ENST00000564272 WDR19Q8NEZ3 1342 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 ASB14A6NK59 587 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 TRDNQ13061 729 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 BAATQ14032 418 aaPredicted RBP23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 ASPRV1Q53RT3 343 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 SLC30A10Q6XR72 485 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 STOX1Q6ZVD7 989 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 CLEC4DQ8WXI8 215 aa23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 RANBP2P49792 3224 aaKnown RBP23.37■■□□□ 1.33
SHCBP1-203ENST00000564272 PTPDC1A2A3K4 754 aa23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 MYADML2A6NDP7 307 aa23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 DUSP11O75319 330 aaKnown RBP23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 IRX5P78411 483 aaPredicted RBP23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 SNX17Q15036 470 aa23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 CDC37Q16543 378 aaPredicted RBP23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 USH1GQ495M9 461 aa23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 TRIM60Q495X7 471 aa23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 MAP4K1Q92918 833 aa23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 RBM8AQ9Y5S9 174 aaKnown RBP23.36■■□□□ 1.33
SHCBP1-203ENST00000564272 A0A1W2PQ45 241 aaPredicted RBP23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 A0A1W2PQY0 241 aa23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 E7EWF7 191 aa23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 PARP1P09874 1014 aaKnown RBP23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 ADGRF4Q8IZF3 695 aa23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 PNMA2Q9UL42 364 aa23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 DNAH12Q6ZR08 3092 aa23.35■■□□□ 1.33
SHCBP1-203ENST00000564272 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.34■■□□□ 1.33
SHCBP1-203ENST00000564272 CALML3P27482 149 aa23.34■■□□□ 1.33
SHCBP1-203ENST00000564272 EEPD1Q7L9B9 569 aa23.34■■□□□ 1.33
SHCBP1-203ENST00000564272 RALYLQ86SE5 291 aaKnown RBP23.34■■□□□ 1.33
SHCBP1-203ENST00000564272 FBXO16Q8IX29 292 aaPredicted RBP23.34■■□□□ 1.33
SHCBP1-203ENST00000564272 KLHDC9Q8NEP7 349 aa23.34■■□□□ 1.33
SHCBP1-203ENST00000564272 C6orf222P0C671 652 aaPredicted RBP23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 ALDH5A1P51649 535 aaPredicted RBP23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 RNF207Q6ZRF8 634 aa23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 CHST3Q7LGC8 479 aa23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 STAG2Q8N3U4 1231 aa23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 NCOA7Q8NI08 942 aa23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 ESYT1Q9BSJ8 1104 aa23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 LSG1Q9H089 658 aaKnown RBP23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 UPF3AQ9H1J1 476 aaKnown RBP23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 SENP2Q9HC62 589 aa23.33■■□□□ 1.33
SHCBP1-203ENST00000564272 LTBP2Q14767 1821 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 A0A1W2PPC1 479 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 IFIT3O14879 490 aaKnown RBP23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 DHX16O60231 1041 aaKnown RBP23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 PTGS1P23219 599 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 BMP8BP34820 402 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 ACLYP53396 1101 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 MDM2Q00987 491 aaPredicted RBP23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 KCNA10Q16322 511 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 QRICH1Q2TAL8 776 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 CCSAPQ6IQ19 270 aaPredicted RBP23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 KIAA1211Q6ZU35 1233 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 MORC4Q8TE76 937 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 TSEN34Q9BSV6 310 aaKnown RBP23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 PDGFCQ9NRA1 345 aa23.32■■□□□ 1.32
SHCBP1-203ENST00000564272 CST5P28325 142 aaPredicted RBP23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 GJA9P57773 515 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 ANTXR2P58335 489 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 RPS6P62753 249 aaKnown RBP23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 TNFAIP2Q03169 654 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 NOL8Q76FK4 1167 aaKnown RBP23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 UBE2OQ9C0C9 1292 aaKnown RBP23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 JMJD4Q9H9V9 463 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 VAT1LQ9HCJ6 419 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 PRDM5Q9NQX1 630 aaPredicted RBP23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 ADD3Q9UEY8 706 aaKnown RBP23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 MYH6P13533 1939 aa23.31■■□□□ 1.32
SHCBP1-203ENST00000564272 MOXD2PA6NHM9 499 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 C1orf53Q5VUE5 145 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 TAPT1Q6NXT6 567 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 MB21D2Q8IYB1 491 aaPredicted RBP23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 SPC25Q9HBM1 224 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 VTA1Q9NP79 307 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 PRKAG2Q9UGJ0 569 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 MAD2L2Q9UI95 211 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 ABCB11O95342 1321 aa23.3■■□□□ 1.32
SHCBP1-203ENST00000564272 ERICH2A1L162 156 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 CTAGE5O15320 804 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 SMPD1P17405 629 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 TLE2Q04725 743 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 WTAPQ15007 396 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 TMEM63BQ5T3F8 832 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 TLK2Q86UE8 772 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 STARD7Q9NQZ5 370 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 PDLIM7Q9NR12 457 aa23.29■■□□□ 1.32
SHCBP1-203ENST00000564272 GNEQ9Y223 722 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms