RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 CCDC74BQ96LY2 380 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 KCNF1Q9H3M0 494 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 SEMA6CQ9H3T2 930 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 SLC12A7Q9Y666 1083 aa8.25□□□□□ -1.09
HERPUD1-208ENST00000563911 OVOS2A0A0G2JMS6 1433 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 OVOS2A0A0J9YW53 1432 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 CRB1P82279 1406 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 OVOS2Q6IE36 1432 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 TNFRSF10CO14798 259 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 LRIG2O94898 1065 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 MAP4P27816 1152 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 POLR2BP30876 1174 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 GBP1P32455 592 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 CAP2P40123 477 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 MAP7Q14244 749 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 ZYXQ15942 572 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 DDB1Q16531 1140 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 ZNF827Q17R98 1081 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 ARMCX6Q7L4S7 300 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 ARMC10Q8N2F6 343 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 PIF1Q9H611 641 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 COL18A1P39060 1754 aa8.24□□□□□ -1.09
HERPUD1-208ENST00000563911 RGPD3A6NKT7 1758 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 RGPD4Q7Z3J3 1758 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 RGS13O14921 159 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 DDAH1O94760 285 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 CHRNA4P43681 627 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 NFKBIBQ15653 356 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 DDR2Q16832 855 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 NOP9Q86U38 636 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 CD163Q86VB7 1156 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 FAM20CQ8IXL6 584 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 BAHD1Q8TBE0 780 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 EZH1Q92800 747 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 MKL1Q969V6 931 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 MRFAP1L1Q96HT8 127 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 SRPK1Q96SB4 655 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 TOPAZ1Q8N9V7 1692 aa8.23□□□□□ -1.09
HERPUD1-208ENST00000563911 BCL9O00512 1426 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 FAM95CA0A1B0GW59 222 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 CHMP4BP1P59074 171 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 CYB5D2Q8WUJ1 264 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 MTFR1LQ9H019 292 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 STK17AQ9UEE5 414 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 ARHGEF28Q8N1W1 1705 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 LTBP3Q9NS15 1303 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 AATKQ6ZMQ8 1374 aa8.22□□□□□ -1.09
HERPUD1-208ENST00000563911 SHANK3Q9BYB0 1731 aa8.21□□□□□ -1.09
HERPUD1-208ENST00000563911 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 DYNC1LI2O43237 492 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 CCNFP41002 786 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 GIMAP6Q6P9H5 292 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 C6orf15Q6UXA7 325 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 NLGN2Q8NFZ4 835 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 DHRS1Q96LJ7 313 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 PHAXQ9H814 394 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 STK32BQ9NY57 414 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 PCDHB10Q9UN67 800 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 MAPK8IP1Q9UQF2 711 aa8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 EIF3AQ14152 1382 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-208ENST00000563911 UBOX5O94941 541 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 GJB6O95452 261 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 PAOXQ6QHF9 649 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 VHLLQ6RSH7 139 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 TOM1L2Q6ZVM7 507 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 FAM178BQ8IXR5 827 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 SLC6A18Q96N87 628 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 DEPDC7Q96QD5 511 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 MIPEPQ99797 713 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 PAPPAQ13219 1627 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
HERPUD1-208ENST00000563911 SLIT3O75094 1523 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 CHD4Q14839 1912 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 B2RBV5 119 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 SMARCA5O60264 1052 aaPredicted RBP8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 GATA4P43694 442 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 CDK5R2Q13319 367 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 GNPTABQ3T906 1256 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 ARHGEF25Q86VW2 580 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 TMEM192Q8IY95 271 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 CCDC113Q9H0I3 377 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 SNTG2Q9NY99 539 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 CEP131Q9UPN4 1083 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 ITSN1Q15811 1721 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 WDR17Q8IZU2 1322 aa8.19□□□□□ -1.1
HERPUD1-208ENST00000563911 CLEC3AO75596 197 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 SLC7A5Q01650 507 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 NCAPHQ15003 741 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 GPR162Q16538 588 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 KIAA1211LQ6NV74 962 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 LETMD1Q6P1Q0 360 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 SEZ6L2Q6UXD5 910 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms