RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 UBA7P41226 1012 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 STX17P56962 302 aa21.62■■□□□ 1.05
SMPD3-203ENST00000563226 NUP88Q99567 741 aaPredicted RBP21.62■■□□□ 1.05
SMPD3-203ENST00000563226 MYO1BO43795 1136 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 SLC37A4O43826 429 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 TDP2O95551 362 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 CLK2P49760 499 aaKnown RBP21.61■■□□□ 1.05
SMPD3-203ENST00000563226 GSDMDP57764 484 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 QRICH1Q2TAL8 776 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 RRAGBQ5VZM2 374 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 RASSF8Q8NHQ8 419 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 SYNRGQ9UMZ2 1314 aa21.61■■□□□ 1.05
SMPD3-203ENST00000563226 SKILP12757 684 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 TNNI2P48788 182 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 SLC16A10Q8TF71 515 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 ZNF70Q9UC06 446 aaPredicted RBP21.6■■□□□ 1.05
SMPD3-203ENST00000563226 F5H6K3 240 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 CBFA2T2O43439 604 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 TECP42680 631 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 KLRC3Q07444 240 aa21.6■■□□□ 1.05
SMPD3-203ENST00000563226 COBLO75128 1261 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 ZBTB7AO95365 584 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 NDUFB10O96000 172 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 RPN1P04843 607 aaKnown RBP21.59■■□□□ 1.05
SMPD3-203ENST00000563226 DLGAP5Q15398 846 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 RBM26Q5T8P6 1007 aaKnown RBP21.59■■□□□ 1.05
SMPD3-203ENST00000563226 CABP7Q86V35 215 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 MTMR9Q96QG7 549 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 TMOD2Q9NZR1 351 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 CNTNAP1P78357 1384 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 PLCG1P19174 1290 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 SNAP25P60880 206 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 CDC37Q16543 378 aaPredicted RBP21.59■■□□□ 1.05
SMPD3-203ENST00000563226 VSTM4Q8IW00 320 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 CDAN1Q8IWY9 1227 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 CUL5Q93034 780 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 AK8Q96MA6 479 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 CTNND2Q9UQB3 1225 aa21.59■■□□□ 1.05
SMPD3-203ENST00000563226 A0A1W2PRG0 241 aa21.58■■□□□ 1.05
SMPD3-203ENST00000563226 TXKP42681 527 aa21.58■■□□□ 1.05
SMPD3-203ENST00000563226 MMTAG2Q9BU76 263 aaKnown RBP21.58■■□□□ 1.05
SMPD3-203ENST00000563226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.58■■□□□ 1.05
SMPD3-203ENST00000563226 CDK11BP21127 795 aaKnown RBP21.57■■□□□ 1.04
SMPD3-203ENST00000563226 ORC2Q13416 577 aaPredicted RBP21.57■■□□□ 1.04
SMPD3-203ENST00000563226 CALCRLQ16602 461 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 CT47A1Q5JQC4 288 aaPredicted RBP21.57■■□□□ 1.04
SMPD3-203ENST00000563226 SPATA1Q5VX52 437 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 GMCL1P1Q8NEA9 526 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 PSTPIP2Q9H939 334 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 HDAC9Q9UKV0 1011 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 GDAQ9Y2T3 454 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 USP27XA6NNY8 438 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 SPDYE2Q495Y8 402 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 IGSF22Q8N9C0 903 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 CCDC150Q8NCX0 1101 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 KBTBD4Q9NVX7 518 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 ZNRF3Q9ULT6 936 aa21.57■■□□□ 1.04
SMPD3-203ENST00000563226 NIM1KQ8IY84 436 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 OGFOD1Q8N543 542 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 FAM151AQ8WW52 585 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 PCDHA1Q9Y5I3 950 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L15C9J2P7 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L13C9JLJ4 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L11C9JVI0 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L18D6R9N7 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L22D6RA61 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L17D6RBQ6 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L19D6RCP7 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L20D6RJB6 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 KLRC4O43908 158 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 TAL1P17542 331 aaPredicted RBP21.56■■□□□ 1.04
SMPD3-203ENST00000563226 MRPL12P52815 198 aaKnown RBP21.56■■□□□ 1.04
SMPD3-203ENST00000563226 GOLGA8FQ08AF8 430 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 GOLGA8DPQ0D2H9 430 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L24Q0WX57 530 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 ZNF658Q5TYW1 1059 aaPredicted RBP21.56■■□□□ 1.04
SMPD3-203ENST00000563226 USP17L6PQ6QN14 398 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 APTXQ7Z2E3 356 aaKnown RBP21.56■■□□□ 1.04
SMPD3-203ENST00000563226 GMCL1Q96IK5 515 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 VEZTQ9HBM0 779 aa21.56■■□□□ 1.04
SMPD3-203ENST00000563226 HERC5Q9UII4 1024 aaKnown RBP21.56■■□□□ 1.04
SMPD3-203ENST00000563226 ATF5Q9Y2D1 282 aaPredicted RBP21.56■■□□□ 1.04
SMPD3-203ENST00000563226 BRCA1P38398 1863 aaKnown RBP21.55■■□□□ 1.04
SMPD3-203ENST00000563226 SFPQP23246 707 aaKnown RBP eCLIP21.55■■□□□ 1.04
SMPD3-203ENST00000563226 ECE1P42892 770 aa21.55■■□□□ 1.04
SMPD3-203ENST00000563226 TERF1P54274 439 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 CXCL9Q07325 125 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 CDKAL1Q5VV42 579 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 SPICE1Q8N0Z3 855 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 C16orf45Q96MC5 204 aaPredicted RBP21.54■■□□□ 1.04
SMPD3-203ENST00000563226 TMEM39BQ9GZU3 492 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 RMND1Q9NWS8 449 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 PIM2Q9P1W9 311 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 MAPK8IP1Q9UQF2 711 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 FER1L6Q2WGJ9 1857 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 SHTN1A0MZ66 631 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 KMT5BQ4FZB7 885 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 GJA10Q969M2 543 aa21.54■■□□□ 1.04
SMPD3-203ENST00000563226 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.54■■□□□ 1.04
SMPD3-203ENST00000563226 SMCHD1A6NHR9 2005 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms