RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
NIP7-203ENST00000562131 ARMCX2Q7L311 632 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 ZNF467Q7Z7K2 595 aaPredicted RBP11.23□□□□□ -0.61
NIP7-203ENST00000562131 HSCBQ8IWL3 235 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 KCNB2Q92953 911 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 IL17RAQ96F46 866 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 FGD4Q96M96 766 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 JAKMIP1Q96N16 626 aaKnown RBP11.23□□□□□ -0.61
NIP7-203ENST00000562131 TTC14Q96N46 770 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 KIF2CQ99661 725 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 LBHD1Q9BQE6 289 aaPredicted RBP11.23□□□□□ -0.61
NIP7-203ENST00000562131 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
NIP7-203ENST00000562131 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
NIP7-203ENST00000562131 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
NIP7-203ENST00000562131 CCPG1Q9ULG6 757 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 SMCHD1A6NHR9 2005 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 PCP11498 1178 aaKnown RBP11.22□□□□□ -0.61
NIP7-203ENST00000562131 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
NIP7-203ENST00000562131 CCDC144BQ3MJ40 725 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 SYDE2Q5VT97 1194 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 TDHQ8IZJ6 230 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 FAM133AQ8N9E0 248 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 ESR2Q92731 530 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
NIP7-203ENST00000562131 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
NIP7-203ENST00000562131 NEDD4P46934 1319 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 A0A1W2PQ45 241 aaPredicted RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 A0A1W2PQY0 241 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 KDM4AO75164 1064 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 ADAMTS4O75173 837 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 DUSP11O75319 330 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 ICAM1P05362 532 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 PDHBP11177 359 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 TLE2Q04725 743 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 BTNL9Q6UXG8 535 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 NOL8Q76FK4 1167 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 UPF3BQ9BZI7 483 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 TM6SF1Q9BZW5 370 aa11.21□□□□□ -0.61
NIP7-203ENST00000562131 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 DDX49Q9Y6V7 483 aaKnown RBP11.21□□□□□ -0.61
NIP7-203ENST00000562131 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.62
NIP7-203ENST00000562131 MYADML2A6NDP7 307 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 ASB14A6NK59 587 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 B4E1Z4 1266 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 ADCY6O43306 1168 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
NIP7-203ENST00000562131 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
NIP7-203ENST00000562131 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 NEK4P51957 841 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 ACLYP53396 1101 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 TRDNQ13061 729 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 BAATQ14032 418 aaPredicted RBP11.2□□□□□ -0.62
NIP7-203ENST00000562131 SNX17Q15036 470 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 KCNA10Q16322 511 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 IQCA1Q86XH1 822 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 KLHDC9Q8NEP7 349 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 VTI1AQ96AJ9 217 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 TSEN34Q9BSV6 310 aaKnown RBP11.2□□□□□ -0.62
NIP7-203ENST00000562131 SPC25Q9HBM1 224 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 STARD7Q9NQZ5 370 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 CYP39A1Q9NYL5 469 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
NIP7-203ENST00000562131 TRIM43BA6NCK2 446 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 E7EWF7 191 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 PQBP1O60828 265 aaKnown RBP11.19□□□□□ -0.62
NIP7-203ENST00000562131 MCM2P49736 904 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 ZNF543Q08ER8 600 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 LRIT3Q3SXY7 679 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 GNASQ5JWF2 1037 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 RUFY3Q7L099 469 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 EEPD1Q7L9B9 569 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 DGKHQ86XP1 1220 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 NCOA7Q8NI08 942 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 BADQ92934 168 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 SNX21Q969T3 373 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 TRIM43Q96BQ3 446 aaPredicted RBP11.19□□□□□ -0.62
NIP7-203ENST00000562131 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
NIP7-203ENST00000562131 UBA5Q9GZZ9 404 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 KATNBL1Q9H079 304 aa11.19□□□□□ -0.62
NIP7-203ENST00000562131 CPVLQ9H3G5 476 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms