RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 USO1O60763 962 aaKnown RBP15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 INF2Q27J81 1249 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 KRT26Q7Z3Y9 468 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 PACS2Q86VP3 889 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 P2RX5Q93086 422 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 MTMR7Q9Y216 660 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 BCL9O00512 1426 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 ZNF804BA4D1E1 1349 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 BICDL2A1A5D9 508 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 RASSF10A6NK89 507 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 TACC1O75410 805 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 MYL1P05976 194 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 CYP2D6P10635 497 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 ANKRD40Q6AI12 368 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 KBTBD4Q9NVX7 518 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 CCNE1P24864 410 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 PARP10Q53GL7 1025 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 CRNKL1Q9BZJ0 848 aaKnown RBP15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 DEF6Q9H4E7 631 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 SNX12Q9UMY4 172 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 JRKLQ9Y4A0 524 aa15.58■□□□□ 0.08
VPS9D1-202ENST00000561976 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 PLEKP08567 350 aaPredicted RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 ASIC1P78348 528 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 MRPS25P82663 173 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 EZH2Q15910 746 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 TYW1BQ6NUM6 668 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 AMOTL1Q8IY63 956 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 ZNF384Q8TF68 577 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 LRRC1Q9BTT6 524 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 DCP1AQ9NPI6 582 aaPredicted RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 CCDC181Q5TID7 509 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 HDAC7Q8WUI4 952 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 PURBQ96QR8 312 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 PSMB7Q99436 277 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 RABEP2Q9H5N1 569 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 TCP11L1Q9NUJ3 509 aa15.57■□□□□ 0.08
VPS9D1-202ENST00000561976 PLCG1P19174 1290 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 CCT5P48643 541 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 HEATR3Q7Z4Q2 680 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 CABP7Q86V35 215 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 CREG2Q8IUH2 290 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 GPIHBP1Q8IV16 184 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 STAG2Q8N3U4 1231 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 AENQ8WTP8 325 aaKnown RBP15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 MLXIPQ9HAP2 919 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 SH3GLB2Q9NR46 395 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 CAPN6Q9Y6Q1 641 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 COL1A1P02452 1464 aaPredicted RBP15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 ZNF263O14978 683 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 MOCS3O95396 460 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 IRAK1P51617 712 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 SLC7A5Q01650 507 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 STK4Q13043 487 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 C2CD5Q86YS7 1000 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 RRP36Q96EU6 259 aaKnown RBP15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 DMGDHQ9UI17 866 aaKnown RBP15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 PCDHA6Q9UN73 950 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 PCDHA8Q9Y5H6 950 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 ITGB4P16144 1822 aa15.56■□□□□ 0.08
VPS9D1-202ENST00000561976 NTSR2O95665 410 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 FCER1AP12319 257 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 UBE4AQ14139 1066 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 MICALL1Q8N3F8 863 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 MMGT1Q8N4V1 131 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 PNMA1Q8ND90 353 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 RUFY1Q96T51 708 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 BTG4Q9NY30 223 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 PCDHA13Q9Y5I0 950 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 CXCR5P32302 372 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 MECOMQ03112 1051 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 PPFIA1Q13136 1202 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 MIIPQ5JXC2 388 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 RCSD1Q6JBY9 416 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 SPATA4Q8NEY3 305 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 LRRC15Q8TF66 581 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 CAPS2Q9BXY5 557 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 FAM207AQ9NSI2 230 aaPredicted RBP15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 STRCP1A6NGW2 1772 aa15.55■□□□□ 0.08
VPS9D1-202ENST00000561976 EBAG9O00559 213 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 AKR1B10O60218 316 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 SHOX2O60902 331 aaPredicted RBP15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 TFAP4Q01664 338 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 NSUN4Q96CB9 384 aaKnown RBP15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 FAM84BQ96KN1 310 aaPredicted RBP15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 ALS2CR12Q96Q35 445 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 ERGIC2Q96RQ1 377 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 TRIM9Q9C026 710 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
VPS9D1-202ENST00000561976 A0A1W2PQJ5 194 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms