RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RBM25P49756 843 aaKnown RBP16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 COL9A3Q14050 684 aaPredicted RBP16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 RTN1Q16799 776 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 FBXO11Q86XK2 927 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 TCEANC2Q96MN5 208 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 PDRG1Q9NUG6 133 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
PKNOX1-209ENST00000560448 DNAJC25-GNG10A0A024R161 153 aa16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 METAP2P50579 478 aaKnown RBP eCLIP16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 TMTC3Q6ZXV5 915 aa16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 ZNF274Q96GC6 653 aaPredicted RBP16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 MYH6P13533 1939 aa16.2■□□□□ 0.18
PKNOX1-209ENST00000560448 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 GOLGA8BA8MQT2 603 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 hCG_1984214I3L0E3 225 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 CYTH3O43739 400 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 ZNF792Q3KQV3 632 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 ZNF713Q8N859 430 aaPredicted RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 TRIB2Q92519 343 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 MAML3Q96JK9 1138 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 MYL10Q9BUA6 226 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 A1CFQ9NQ94 594 aaKnown RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 BIN2Q9UBW5 565 aaPredicted RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 B4DLN1 442 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 IGHA2P01877 340 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 INHAP05111 366 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 CPA1P15085 419 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 MRPL12P52815 198 aaKnown RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 GHRHRQ02643 423 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 MAP3K21Q5TCX8 1036 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 MAMDC4Q6UXC1 1216 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 CPVLQ9H3G5 476 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 CYP39A1Q9NYL5 469 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 ADD3Q9UEY8 706 aaKnown RBP16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
PKNOX1-209ENST00000560448 RPTORQ8N122 1335 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 MSCO60682 206 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 COBLO75128 1261 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 SNAP25P60880 206 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 APOBRQ0VD83 1088 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 SH3TC2Q8TF17 1288 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 PIGSQ96S52 555 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 TMEM106CQ9BVX2 250 aa16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 HMX1Q9NP08 348 aaPredicted RBP16.18■□□□□ 0.18
PKNOX1-209ENST00000560448 HTTP42858 3142 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 PLXNA1Q9UIW2 1896 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 ASB14A6NK59 587 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 ELNP15502 786 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 RXRAP19793 462 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 USH1GQ495M9 461 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 MUM1L1Q5H9M0 696 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 DNERQ8NFT8 737 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 NPLOC4Q8TAT6 608 aa16.17■□□□□ 0.18
PKNOX1-209ENST00000560448 RBBP6Q7Z6E9 1792 aaKnown RBP16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 PLEKHA8P1O95397 391 aa16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 NSMFQ6X4W1 530 aa16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 CCDC144CPQ8IYA2 1237 aa16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
PKNOX1-209ENST00000560448 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 NFIBO00712 420 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 PGK2P07205 417 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 GJB1P08034 283 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 PRKAR2AP13861 404 aaKnown RBP16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 NEK4P51957 841 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 SLC35G1Q2M3R5 365 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 FAM177A1Q8N128 213 aaPredicted RBP16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 GLT8D2Q9H1C3 349 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 PAK6Q9NQU5 681 aaPredicted RBP16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
PKNOX1-209ENST00000560448 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 CDKL5O76039 1030 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 IFNAR1P17181 557 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 RPS6P62753 249 aaKnown RBP16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 FUT2Q10981 343 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 RABEP1Q15276 862 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 CCL14Q16627 93 aa16.14■□□□□ 0.17
PKNOX1-209ENST00000560448 PPP1R18Q6NYC8 613 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms