RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
SMAD3-206ENST00000558739 TNKSO95271 1327 aa14.41□□□□□ -0.1
SMAD3-206ENST00000558739 SCN10AQ9Y5Y9 1956 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 CABYRO75952 493 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 COPB2P35606 906 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 DEFB103AP81534 67 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 TCF15Q12870 199 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 PHOSPHO2Q8TCD6 241 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 PDGFCQ9NRA1 345 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 MUTYHQ9UIF7 546 aa14.4□□□□□ -0.1
SMAD3-206ENST00000558739 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 CEP250Q9BV73 2442 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 DYNC1LI2O43237 492 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 GFRA3O60609 400 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 IRS1P35568 1242 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 NEK9Q8TD19 979 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 ZNF512BQ96KM6 892 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 SLF1Q9BQI6 1058 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 SH2D4AQ9H788 454 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 RAVER2Q9HCJ3 691 aaKnown RBP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 DCP1AQ9NPI6 582 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-206ENST00000558739 PLXNA3P51805 1871 aa14.39□□□□□ -0.11
SMAD3-206ENST00000558739 ACTN1P12814 892 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
SMAD3-206ENST00000558739 TCTN1Q2MV58 587 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 EEPD1Q7L9B9 569 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 FBXO16Q8IX29 292 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-206ENST00000558739 ANKRD35Q8N283 1001 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMAD3-206ENST00000558739 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
SMAD3-206ENST00000558739 CHD8Q9HCK8 2581 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 IQCF3P0C7M6 154 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 CERS3Q8IU89 383 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 MFSD14AQ96MC6 490 aa14.37□□□□□ -0.11
SMAD3-206ENST00000558739 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
SMAD3-206ENST00000558739 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
SMAD3-206ENST00000558739 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 SOWAHBA6NEL2 793 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 PRKAB2O43741 272 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 PTPN5P54829 565 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 ERVK-21P61565 698 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 SLFNL1Q499Z3 407 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMAD3-206ENST00000558739 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
SMAD3-206ENST00000558739 AP5M1Q9H0R1 490 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 GOPCQ9HD26 462 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 GPR108Q9NPR9 543 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 SWAP70Q9UH65 585 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 TNNQ9UQP3 1299 aa14.36□□□□□ -0.11
SMAD3-206ENST00000558739 BAHCC1Q9P281 2608 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 RGS20O76081 388 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 CDK8P49336 464 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 FOXK2Q01167 660 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 GPNMBQ14956 572 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 FAM47CQ5HY64 1035 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 TAPT1Q6NXT6 567 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 FAM117BQ6P1L5 589 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMAD3-206ENST00000558739 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 TGS1Q96RS0 853 aaKnown RBP14.35□□□□□ -0.11
SMAD3-206ENST00000558739 HDAC5Q9UQL6 1122 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 COL4A6Q14031 1691 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 MYH4Q9Y623 1939 aa14.35□□□□□ -0.11
SMAD3-206ENST00000558739 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 GNAI3P08754 354 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 PDE6AP16499 860 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 KCNJ6P48051 423 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
SMAD3-206ENST00000558739 EP400NLQ6ZTU2 488 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 ADHFE1Q8IWW8 467 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 KIFC2Q96AC6 838 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 EAF2Q96CJ1 260 aaPredicted RBP14.34□□□□□ -0.11
SMAD3-206ENST00000558739 ZBED2Q9BTP6 218 aa14.34□□□□□ -0.11
SMAD3-206ENST00000558739 MICAL3Q7RTP6 2002 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 ZEB2O60315 1214 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 BAIAP3O94812 1187 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 NDUFB10O96000 172 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 RFC2P35250 354 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-206ENST00000558739 CLUL1Q15846 466 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 NBPF20Q3BBV1 942 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 PURBQ96QR8 312 aaKnown RBP14.33□□□□□ -0.12
SMAD3-206ENST00000558739 API5Q9BZZ5 524 aaKnown RBP14.33□□□□□ -0.12
SMAD3-206ENST00000558739 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 SLC38A10Q9HBR0 1119 aa14.33□□□□□ -0.12
SMAD3-206ENST00000558739 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
SMAD3-206ENST00000558739 IGSF3O75054 1194 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 GJB5O95377 273 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 MYL3P08590 195 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms