RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ANP32CO43423 234 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 TNFAIP2Q03169 654 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 FAM178BQ8IXR5 827 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 CCDC144CPQ8IYA2 1237 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 TRMT2AQ8IZ69 625 aaKnown RBP8.15□□□□□ -1.1
LRRC28-207ENST00000558500 PHOSPHO2Q8TCD6 241 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 SDR42E1Q8WUS8 393 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 EAF2Q96CJ1 260 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-207ENST00000558500 UIMC1Q96RL1 719 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 SLC9A7Q96T83 725 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 SLF1Q9BQI6 1058 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 KCNH6Q9H252 994 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 KANSL2Q9H9L4 492 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 GOPCQ9HD26 462 aa8.15□□□□□ -1.1
LRRC28-207ENST00000558500 GNEQ9Y223 722 aaKnown RBP8.15□□□□□ -1.1
LRRC28-207ENST00000558500 SMCHD1A6NHR9 2005 aa8.15□□□□□ -1.11
LRRC28-207ENST00000558500 RAD21O60216 631 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 ZEB2O60315 1214 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 SURF6O75683 361 aaKnown RBP8.14□□□□□ -1.11
LRRC28-207ENST00000558500 ACTN1P12814 892 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 ALADP13716 330 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 PDE6AP16499 860 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 CDK8P49336 464 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 PSMC6P62333 389 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
LRRC28-207ENST00000558500 SLC9C2Q5TAH2 1124 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 NOL8Q76FK4 1167 aaKnown RBP8.14□□□□□ -1.11
LRRC28-207ENST00000558500 SPRED2Q7Z698 418 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 DEFB128Q7Z7B8 93 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 TLK2Q86UE8 772 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 HERC6Q8IVU3 1022 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 ANKRD35Q8N283 1001 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 LCORLQ8N3X6 602 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 FBXO22Q8NEZ5 403 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 SSH3Q8TE77 659 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 FBXL18Q96ME1 805 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 AP5M1Q9H0R1 490 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 ALDH8A1Q9H2A2 487 aaPredicted RBP8.14□□□□□ -1.11
LRRC28-207ENST00000558500 UBE2ZQ9H832 354 aaPredicted RBP8.14□□□□□ -1.11
LRRC28-207ENST00000558500 LMCD1Q9NZU5 365 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 FBXO40Q9UH90 709 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 CACNA1AO00555 2505 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 CDK5RAP2Q96SN8 1893 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 LRRC37A2A6NM11 1700 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 REV3LO60673 3130 aa8.14□□□□□ -1.11
LRRC28-207ENST00000558500 ZNF532Q9HCE3 1301 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 KIF28PB7ZC32 967 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 DYNC1LI2O43237 492 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 ZBED4O75132 1171 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 PPP1R37O75864 691 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 SUPT20HL2P0C7V6 817 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 CYP2C9P11712 490 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 SMPD1P17405 629 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 PTGS1P23219 599 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 SSTR3P32745 418 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 SLC4A3P48751 1232 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 ATP8B2P98198 1209 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 LEXMQ3ZCV2 418 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 CPXCR1Q8N123 301 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 PRPF38AQ8NAV1 312 aaKnown RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 CHST13Q8NET6 341 aa8.13□□□□□ -1.11
LRRC28-207ENST00000558500 NUP88Q99567 741 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 RAVER2Q9HCJ3 691 aaKnown RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 TRMT13Q9NUP7 481 aaKnown RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 NOP58Q9Y2X3 529 aaKnown RBP8.13□□□□□ -1.11
LRRC28-207ENST00000558500 TNKSO95271 1327 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 MYH1P12882 1939 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 CYP2D7A0A087X1C5 515 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 F5H6K3 240 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 PRKAB2O43741 272 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 BCAR3O75815 825 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 TRIM27P14373 513 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 RFC2P35250 354 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 CNTN2Q02246 1040 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 KLRC3Q07444 240 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 TTF1Q15361 905 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-207ENST00000558500 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 FAM133AQ8N9E0 248 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-207ENST00000558500 GDPD5Q8WTR4 605 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.12□□□□□ -1.11
LRRC28-207ENST00000558500 ARMT1Q9H993 441 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 SLC38A10Q9HBR0 1119 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 ATP8A2Q9NTI2 1148 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 TNNQ9UQP3 1299 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 BOLA1Q9Y3E2 137 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 Q9Y3F1 56 aa8.12□□□□□ -1.11
LRRC28-207ENST00000558500 CTDP1Q9Y5B0 961 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-207ENST00000558500 POTEB3A0JP26 581 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 LCHNA4D1U4 455 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 SOWAHBA6NEL2 793 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 ASB14A6NK59 587 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 USP17L21D6R901 530 aa8.11□□□□□ -1.11
LRRC28-207ENST00000558500 DCXO43602 365 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms