RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 SPC25Q9HBM1 224 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 VAT1LQ9HCJ6 419 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 A1CFQ9NQ94 594 aaKnown RBP9.13□□□□□ -0.95
PSEN1-222ENST00000557356 CYP39A1Q9NYL5 469 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 FLRT1Q9NZU1 646 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 FAM184BQ9ULE4 1060 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 RLFQ13129 1914 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 CCDC196A0A1B0GTZ2 297 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 ZBTB5O15062 677 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 RARBP10826 455 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 AKR1A1P14550 325 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 CCND3P30281 292 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-222ENST00000557356 RCAN1P53805 252 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 TRIM32Q13049 653 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 CDC37Q16543 378 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-222ENST00000557356 LHX8Q68G74 356 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 NSMFQ6X4W1 530 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 RNF207Q6ZRF8 634 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 CHST3Q7LGC8 479 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 SGMS1Q86VZ5 419 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 SKAP1Q86WV1 359 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 FAM133AQ8N9E0 248 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 NUP133Q8WUM0 1156 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 KCNB2Q92953 911 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 RIOX1Q9H6W3 641 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 LY9Q9HBG7 655 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 RBM28Q9NW13 759 aaKnown RBP9.12□□□□□ -0.95
PSEN1-222ENST00000557356 MAD2L2Q9UI95 211 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 NR2E3Q9Y5X4 410 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 LAMA4Q16363 1823 aa9.12□□□□□ -0.95
PSEN1-222ENST00000557356 A0A0G2JMZ2 1700 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 PCNTO95613 3336 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 ZSWIM8A7E2V4 1837 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 ZNF236Q9UL36 1845 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 PNMA6FA0A0J9YX94 578 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 PTPDC1A2A3K4 754 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 KBTBD13C9JR72 458 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 SH2B2O14492 632 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-222ENST00000557356 ANTXR2P58335 489 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 SNAP25P60880 206 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 EXOSC10Q01780 885 aaKnown RBP9.11□□□□□ -0.95
PSEN1-222ENST00000557356 ACVR2BQ13705 512 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 BAATQ14032 418 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-222ENST00000557356 QRICH1Q2TAL8 776 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 MUM1L1Q5H9M0 696 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 IQSEC1Q6DN90 963 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 BLOC1S2Q6QNY1 142 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 RNF180Q86T96 592 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 TEX2Q8IWB9 1127 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 FBXL16Q8N461 479 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 FANCBQ8NB91 859 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 DPF3Q92784 378 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 MTMR8Q96EF0 704 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 RRP36Q96EU6 259 aaKnown RBP9.11□□□□□ -0.95
PSEN1-222ENST00000557356 SPZ1Q9BXG8 430 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 C11orf49Q9H6J7 331 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 JMJD4Q9H9V9 463 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-222ENST00000557356 SEC63Q9UGP8 760 aaKnown RBP9.11□□□□□ -0.95
PSEN1-222ENST00000557356 PCDHA1Q9Y5I3 950 aa9.11□□□□□ -0.95
PSEN1-222ENST00000557356 DOCK3Q8IZD9 2030 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 DNM1LO00429 736 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 DUSP11O75319 330 aaKnown RBP9.1□□□□□ -0.95
PSEN1-222ENST00000557356 SNAI1O95863 264 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-222ENST00000557356 CNTN2Q02246 1040 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 USH1GQ495M9 461 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 ARMCX2Q7L311 632 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 UBE2Q1Q7Z7E8 422 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 CCDC144CPQ8IYA2 1237 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 STAG2Q8N3U4 1231 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 NSUN6Q8TEA1 469 aaKnown RBP9.1□□□□□ -0.95
PSEN1-222ENST00000557356 CLEC4DQ8WXI8 215 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 SHISA4Q96DD7 197 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 PAWRQ96IZ0 340 aaKnown RBP9.1□□□□□ -0.95
PSEN1-222ENST00000557356 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 TM6SF1Q9BZW5 370 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 VTA1Q9NP79 307 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 XPNPEP3Q9NQH7 507 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 Q9Y3F1 56 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 TAF6LQ9Y6J9 622 aa9.1□□□□□ -0.95
PSEN1-222ENST00000557356 SOWAHBA6NEL2 793 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 NFIBO00712 420 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 ZBTB43O43298 467 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 ZEB2O60315 1214 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 EVI5O60447 810 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 ZNF865P0CJ78 1059 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-222ENST00000557356 CALML3P27482 149 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 RPS6P62753 249 aaKnown RBP9.09□□□□□ -0.95
PSEN1-222ENST00000557356 PDE4DQ08499 809 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 BRDTQ58F21 947 aaPredicted RBP9.09□□□□□ -0.95
PSEN1-222ENST00000557356 PRAMEF19Q5SWL8 479 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
PSEN1-222ENST00000557356 APOA5Q6Q788 366 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 RASGRP2Q7LDG7 609 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 RASEFQ8IZ41 740 aa9.09□□□□□ -0.95
PSEN1-222ENST00000557356 PCSK9Q8NBP7 692 aaKnown RBP9.09□□□□□ -0.95
PSEN1-222ENST00000557356 MORC4Q8TE76 937 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms