RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 UBXN2AP68543 259 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 CYP4A11Q02928 519 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 NFIAQ12857 509 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 PTPROQ16827 1216 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 PSTPIP2Q9H939 334 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
TMEM55B-207ENST00000557041 TAF1P21675 1872 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 PMS1P54277 932 aaKnown RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 CLRN2A0PK11 232 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 MEIS1O00470 390 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 MFAP3LO75121 409 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 CLCN6P51797 869 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 STK4Q13043 487 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 REXO1L1PQ8IX06 675 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 HSPA1LP34931 641 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 KLK7P49862 253 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 MRPS25P82663 173 aaKnown RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 ARFGAP3Q9NP61 516 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
TMEM55B-207ENST00000557041 MRPL12P52815 198 aaKnown RBP17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 CHMP4BP1P59074 171 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 NPY5RQ15761 445 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 CYP26C1Q6V0L0 522 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 CNOT6LQ96LI5 555 aaKnown RBP17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 A0A1B0GTH6 734 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 RNASE9P60153 205 aaKnown RBP17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 PLS1Q14651 629 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 MTRQ99707 1265 aa17.14■□□□□ 0.33
TMEM55B-207ENST00000557041 GYPCP04921 128 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 ZNF18P17022 549 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 PRR16Q569H4 304 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 ANKRD7Q92527 254 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 GOLGA1Q92805 767 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 RWDD2AQ9UIY3 292 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 H7C1D1 291 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 SHROOM1Q2M3G4 852 aaPredicted RBP17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 ZMYND10O75800 440 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 ARL6IP4Q66PJ3 421 aaKnown RBP17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 TMTC1Q8IUR5 882 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 FEZ1Q99689 392 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 DDX25Q9UHL0 483 aaKnown RBP17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 ADGRG1Q9Y653 693 aa17.13■□□□□ 0.33
TMEM55B-207ENST00000557041 TTLL1O95922 423 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 PPARDQ03181 441 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 MAEAQ7L5Y9 396 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 TSG101Q99816 390 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 LZTS2Q9BRK4 669 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 ABL1P00519 1130 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 DDR1Q08345 913 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 AEBP2Q6ZN18 517 aaPredicted RBP17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 SMCR8Q8TEV9 937 aaPredicted RBP17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 DDX4Q9NQI0 724 aaKnown RBP17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 SRGAP2O75044 1071 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CFBP00751 764 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 CHRNA5P30532 468 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 PKNOX2Q96KN3 472 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 NUP98P52948 1817 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 LAMA4Q16363 1823 aa17.12■□□□□ 0.33
TMEM55B-207ENST00000557041 TJP1Q07157 1748 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 PDHBP11177 359 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 CUL5Q93034 780 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 AGPAT5Q9NUQ2 364 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 MTMR4Q9NYA4 1195 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 LAMB4A4D0S4 1761 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 BICDL2A1A5D9 508 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 SEPT2Q15019 361 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 CCDC181Q5TID7 509 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
TMEM55B-207ENST00000557041 SLC30A10Q6XR72 485 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms