RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 SLC30A10Q6XR72 485 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 ESYT1Q9BSJ8 1104 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 SENP6Q9GZR1 1112 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-224ENST00000556737 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
SHMT2-224ENST00000556737 ZHX1Q9UKY1 873 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-224ENST00000556737 ZMYND8Q9ULU4 1186 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-224ENST00000556737 RBM8AQ9Y5S9 174 aaKnown RBP12.1□□□□□ -0.47
SHMT2-224ENST00000556737 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
SHMT2-224ENST00000556737 MYADML2A6NDP7 307 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 PGK1P00558 417 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 SYN1P17600 705 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 ANTXR2P58335 489 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 ACVR2BQ13705 512 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 COL9A3Q14050 684 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-224ENST00000556737 IFIT1BQ5T764 474 aaKnown RBP12.09□□□□□ -0.47
SHMT2-224ENST00000556737 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 MB21D2Q8IYB1 491 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-224ENST00000556737 ARRDC4Q8NCT1 418 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 MORC4Q8TE76 937 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 PURBQ96QR8 312 aaKnown RBP12.09□□□□□ -0.47
SHMT2-224ENST00000556737 GDF15Q99988 308 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
SHMT2-224ENST00000556737 SZT2Q5T011 3432 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 ADCYAP1R1P41586 468 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHMT2-224ENST00000556737 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-224ENST00000556737 RTP1P59025 263 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-224ENST00000556737 CDC37Q16543 378 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-224ENST00000556737 SLC35G1Q2M3R5 365 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-224ENST00000556737 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 KLHDC9Q8NEP7 349 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
SHMT2-224ENST00000556737 ABHD16BQ9H3Z7 469 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 FAM184BQ9ULE4 1060 aa12.08□□□□□ -0.48
SHMT2-224ENST00000556737 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 CTAGE5O15320 804 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 DUSP11O75319 330 aaKnown RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 MYCNP04198 464 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 PARP1P09874 1014 aaKnown RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 CST5P28325 142 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 BAATQ14032 418 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 USH1GQ495M9 461 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 SLC39A5Q6ZMH5 540 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 RALYLQ86SE5 291 aaKnown RBP12.07□□□□□ -0.48
SHMT2-224ENST00000556737 RNF180Q86T96 592 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 NCOA7Q8NI08 942 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 MAD2L2Q9UI95 211 aa12.07□□□□□ -0.48
SHMT2-224ENST00000556737 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-224ENST00000556737 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 PALM3A6NDB9 673 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-224ENST00000556737 ASB14A6NK59 587 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 PTGS1P23219 599 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-224ENST00000556737 GJA9P57773 515 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 RPS6P62753 249 aaKnown RBP12.06□□□□□ -0.48
SHMT2-224ENST00000556737 NKX3-2P78367 333 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 TRDNQ13061 729 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 GRM4Q14833 912 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 QRICH1Q2TAL8 776 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 C1orf53Q5VUE5 145 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 TAPT1Q6NXT6 567 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-224ENST00000556737 FERMT2Q96AC1 680 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
SHMT2-224ENST00000556737 A0A1W2PPC1 479 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 PTPDC1A2A3K4 754 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 OPLAHO14841 1288 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
SHMT2-224ENST00000556737 SLC27A2O14975 620 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-224ENST00000556737 EDNRBP24530 442 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 BMP8BP34820 402 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 TROAPQ12815 778 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 NECTIN1Q15223 517 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 CREB3L3Q68CJ9 461 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 IGDCC4Q8TDY8 1250 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
SHMT2-224ENST00000556737 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 VTA1Q9NP79 307 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-224ENST00000556737 PDLIM7Q9NR12 457 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 PDGFCQ9NRA1 345 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 GNEQ9Y223 722 aaKnown RBP12.05□□□□□ -0.48
SHMT2-224ENST00000556737 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms