RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SNCBQ16143 134 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 PKN1Q16512 942 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 CCDC121Q6ZUS5 278 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 IQCA1Q86XH1 822 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 CMTR1Q8N1G2 835 aaKnown RBP8.65□□□□□ -1.03
CHD8-209ENST00000555935 WHAMMQ8TF30 809 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 P3H4Q92791 437 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 MIEF2Q96C03 454 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 SHISA4Q96DD7 197 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 DHTKD1Q96HY7 919 aaPredicted RBP8.65□□□□□ -1.03
CHD8-209ENST00000555935 ERGIC2Q96RQ1 377 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 TUBGCP2Q9BSJ2 902 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 UBAC1Q9BSL1 405 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 PCDHA13Q9Y5I0 950 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 TACC3Q9Y6A5 838 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 CAPN6Q9Y6Q1 641 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 BICDL2A1A5D9 508 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 TRIM49BA6NDI0 452 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 B4DLN1 442 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 MBD4O95243 580 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 PPP1R2P41236 205 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 GUCY1A3Q02108 690 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 CYP27A1Q02318 531 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 IFFO1Q0D2I5 559 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 TCIRG1Q13488 830 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 CRYMQ14894 314 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 CFAP221Q4G0U5 840 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 RRP12Q5JTH9 1297 aaKnown RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 KCTD16Q68DU8 428 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 CYB5RLQ6IPT4 315 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 EIF1ADQ8N9N8 165 aaKnown RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 N4BP2L2Q92802 583 aaPredicted RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 ZBTB3Q9H5J0 574 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 RBM28Q9NW13 759 aaKnown RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 NLRP2Q9NX02 1062 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 MEGF6O75095 1541 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 RASSF10A6NK89 507 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 GSG1L2A8MUP6 293 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 ZNF263O14978 683 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 EZRP15311 586 aaKnown RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 STAT6P42226 847 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 MATR3P43243 847 aaKnown RBP eCLIP8.64□□□□□ -1.03
CHD8-209ENST00000555935 HDLBPQ00341 1268 aaKnown RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 FUT2Q10981 343 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 MAP3K12Q12852 859 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 IFT88Q13099 833 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 FKBP15Q5T1M5 1219 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 TTI2Q6NXR4 508 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 NFRKBQ6P4R8 1299 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 LRIG3Q6UXM1 1119 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 ARMC9Q7Z3E5 817 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
CHD8-209ENST00000555935 CCDC114Q96M63 670 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 PLAGL2Q9UPG8 496 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 MAPK8IP1Q9UQF2 711 aa8.64□□□□□ -1.03
CHD8-209ENST00000555935 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 PNPLA7Q6ZV29 1317 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 GOLGA6L10A6NI86 522 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 WNT7AO00755 349 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 PJA2O43164 708 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 RHOBTB3O94955 611 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 MOCS3O95396 460 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 SLC8A1P32418 973 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 PMS1P54277 932 aaKnown RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 ITGB3BPQ13352 177 aaPredicted RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 SEC23AQ15436 765 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 RNF10Q8N5U6 811 aaKnown RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 CSGALNACT2Q8N6G5 542 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 GIMAP8Q8ND71 665 aaPredicted RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 TTLL11Q8NHH1 800 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CYFIP2Q96F07 1278 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 SGSM3Q96HU1 749 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 HINFPQ9BQA5 517 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 A0A1B0GUA9 196 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 GRID2IPA4D2P6 1211 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 E7EVH7 732 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CYP27B1O15528 508 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 MYCNP04198 464 aaPredicted RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 CALM1P0DP23 149 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CALM2P0DP24 149 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CALM3P0DP25 149 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CALRP27797 417 aaKnown RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 KIF11P52732 1056 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CYB5D1Q6P9G0 228 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 LDHAL6AQ6ZMR3 332 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 TEX11Q8IYF3 940 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 SMCR8Q8TEV9 937 aaPredicted RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 PIK3R5Q8WYR1 880 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 MLXIPQ9HAP2 919 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 RBM12Q9NTZ6 932 aaKnown RBP8.63□□□□□ -1.03
CHD8-209ENST00000555935 NFU1Q9UMS0 254 aa8.63□□□□□ -1.03
CHD8-209ENST00000555935 CCDC189A1A4V9 331 aa8.62□□□□□ -1.03
CHD8-209ENST00000555935 CCNE1P24864 410 aa8.62□□□□□ -1.03
CHD8-209ENST00000555935 HSPA9P38646 679 aaKnown RBP8.62□□□□□ -1.03
CHD8-209ENST00000555935 CARSP49589 748 aaKnown RBP8.62□□□□□ -1.03
CHD8-209ENST00000555935 NPY5RQ15761 445 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms