RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ADAMTS4O75173 837 aa28.65■■■□□ 2.18
PRKCH-216ENST00000555542 NOL8Q76FK4 1167 aaKnown RBP28.65■■■□□ 2.18
PRKCH-216ENST00000555542 A0A1W2PQ45 241 aaPredicted RBP28.64■■■□□ 2.18
PRKCH-216ENST00000555542 A0A1W2PQY0 241 aa28.64■■■□□ 2.18
PRKCH-216ENST00000555542 PTPDC1A2A3K4 754 aa28.64■■■□□ 2.18
PRKCH-216ENST00000555542 C6orf222P0C671 652 aaPredicted RBP28.64■■■□□ 2.18
PRKCH-216ENST00000555542 TRDNQ13061 729 aa28.64■■■□□ 2.18
PRKCH-216ENST00000555542 ENAHQ8N8S7 591 aaPredicted RBP28.64■■■□□ 2.18
PRKCH-216ENST00000555542 SNX17Q15036 470 aa28.63■■■□□ 2.17
PRKCH-216ENST00000555542 TSEN34Q9BSV6 310 aaKnown RBP28.63■■■□□ 2.17
PRKCH-216ENST00000555542 NFIBO00712 420 aa28.62■■■□□ 2.17
PRKCH-216ENST00000555542 BAATQ14032 418 aaPredicted RBP28.62■■■□□ 2.17
PRKCH-216ENST00000555542 TDHQ8IZJ6 230 aa28.62■■■□□ 2.17
PRKCH-216ENST00000555542 NUP133Q8WUM0 1156 aa28.62■■■□□ 2.17
PRKCH-216ENST00000555542 UBA5Q9GZZ9 404 aa28.62■■■□□ 2.17
PRKCH-216ENST00000555542 STARD7Q9NQZ5 370 aa28.62■■■□□ 2.17
PRKCH-216ENST00000555542 ADD3Q9UEY8 706 aaKnown RBP28.62■■■□□ 2.17
PRKCH-216ENST00000555542 U3KPZ7 1027 aaPredicted RBP28.62■■■□□ 2.17
PRKCH-216ENST00000555542 MOXD2PA6NHM9 499 aa28.61■■■□□ 2.17
PRKCH-216ENST00000555542 DHX16O60231 1041 aaKnown RBP28.61■■■□□ 2.17
PRKCH-216ENST00000555542 ACLYP53396 1101 aa28.61■■■□□ 2.17
PRKCH-216ENST00000555542 KCNA10Q16322 511 aa28.61■■■□□ 2.17
PRKCH-216ENST00000555542 IFIT1BQ5T764 474 aaKnown RBP28.61■■■□□ 2.17
PRKCH-216ENST00000555542 EEPD1Q7L9B9 569 aa28.61■■■□□ 2.17
PRKCH-216ENST00000555542 ANKS1AQ92625 1134 aa28.61■■■□□ 2.17
PRKCH-216ENST00000555542 CPVLQ9H3G5 476 aa28.61■■■□□ 2.17
PRKCH-216ENST00000555542 MYADML2A6NDP7 307 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 ADCY6O43306 1168 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 CALML3P27482 149 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 TNFAIP2Q03169 654 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 PTH1RQ03431 593 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 USH1GQ495M9 461 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 ASPRV1Q53RT3 343 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 C1orf53Q5VUE5 145 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 PCSK9Q8NBP7 692 aaKnown RBP28.6■■■□□ 2.17
PRKCH-216ENST00000555542 KLHDC9Q8NEP7 349 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 PURBQ96QR8 312 aaKnown RBP28.6■■■□□ 2.17
PRKCH-216ENST00000555542 KATNBL1Q9H079 304 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 DDX49Q9Y6V7 483 aaKnown RBP28.6■■■□□ 2.17
PRKCH-216ENST00000555542 WDR19Q8NEZ3 1342 aa28.6■■■□□ 2.17
PRKCH-216ENST00000555542 PARP1P09874 1014 aaKnown RBP28.59■■■□□ 2.17
PRKCH-216ENST00000555542 RNF207Q6ZRF8 634 aa28.59■■■□□ 2.17
PRKCH-216ENST00000555542 FBXO16Q8IX29 292 aaPredicted RBP28.59■■■□□ 2.17
PRKCH-216ENST00000555542 VTI1AQ96AJ9 217 aa28.59■■■□□ 2.17
PRKCH-216ENST00000555542 GLT1D1Q96MS3 346 aa28.59■■■□□ 2.17
PRKCH-216ENST00000555542 LRRC37A2A6NM11 1700 aa28.59■■■□□ 2.17
PRKCH-216ENST00000555542 ASTN1O14525 1302 aa28.59■■■□□ 2.17
PRKCH-216ENST00000555542 LCTP09848 1927 aa28.59■■■□□ 2.17
PRKCH-216ENST00000555542 PQBP1O60828 265 aaKnown RBP28.58■■■□□ 2.17
PRKCH-216ENST00000555542 GJA9P57773 515 aa28.58■■■□□ 2.17
PRKCH-216ENST00000555542 TLE2Q04725 743 aa28.58■■■□□ 2.17
PRKCH-216ENST00000555542 CDC37Q16543 378 aaPredicted RBP28.58■■■□□ 2.17
PRKCH-216ENST00000555542 GNASQ5JWF2 1037 aa28.58■■■□□ 2.17
PRKCH-216ENST00000555542 SLC30A10Q6XR72 485 aa28.58■■■□□ 2.17
PRKCH-216ENST00000555542 RALYLQ86SE5 291 aaKnown RBP28.58■■■□□ 2.17
PRKCH-216ENST00000555542 RANBP2P49792 3224 aaKnown RBP28.58■■■□□ 2.17
PRKCH-216ENST00000555542 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 SOX1O00570 391 aaPredicted RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 SGSM2O43147 1006 aa28.57■■■□□ 2.16
PRKCH-216ENST00000555542 CYP21A2P08686 494 aa28.57■■■□□ 2.16
PRKCH-216ENST00000555542 CST5P28325 142 aaPredicted RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 ALDH5A1P51649 535 aaPredicted RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 IRX5P78411 483 aaPredicted RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 CLEC4DQ8WXI8 215 aa28.57■■■□□ 2.16
PRKCH-216ENST00000555542 MPHOSPH6Q99547 160 aaKnown RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 UPF3AQ9H1J1 476 aaKnown RBP28.57■■■□□ 2.16
PRKCH-216ENST00000555542 PDLIM7Q9NR12 457 aa28.57■■■□□ 2.16
PRKCH-216ENST00000555542 LTBP2Q14767 1821 aa28.57■■■□□ 2.16
PRKCH-216ENST00000555542 DNAH12Q6ZR08 3092 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 ERICH2A1L162 156 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 ASGR1P07306 291 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 CYB5R4Q7L1T6 521 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 TLK2Q86UE8 772 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 ADGRF4Q8IZF3 695 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 LRCH3Q96II8 777 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 AP5M1Q9H0R1 490 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 VTA1Q9NP79 307 aa28.56■■■□□ 2.16
PRKCH-216ENST00000555542 CLTBP09497 229 aa28.55■■■□□ 2.16
PRKCH-216ENST00000555542 CCSAPQ6IQ19 270 aaPredicted RBP28.55■■■□□ 2.16
PRKCH-216ENST00000555542 KIAA1211Q6ZU35 1233 aa28.55■■■□□ 2.16
PRKCH-216ENST00000555542 VAT1LQ9HCJ6 419 aa28.55■■■□□ 2.16
PRKCH-216ENST00000555542 MYH6P13533 1939 aa28.54■■■□□ 2.16
PRKCH-216ENST00000555542 RPS6P62753 249 aaKnown RBP28.54■■■□□ 2.16
PRKCH-216ENST00000555542 IQSEC1Q6DN90 963 aa28.54■■■□□ 2.16
PRKCH-216ENST00000555542 SH3RF1Q7Z6J0 888 aa28.54■■■□□ 2.16
PRKCH-216ENST00000555542 NCOA7Q8NI08 942 aa28.54■■■□□ 2.16
PRKCH-216ENST00000555542 PDGFCQ9NRA1 345 aa28.54■■■□□ 2.16
PRKCH-216ENST00000555542 ABCB11O95342 1321 aa28.53■■■□□ 2.16
PRKCH-216ENST00000555542 DCDC2CA8MYV0 355 aa28.53■■■□□ 2.16
PRKCH-216ENST00000555542 IFIT3O14879 490 aaKnown RBP28.53■■■□□ 2.16
PRKCH-216ENST00000555542 BEX3Q00994 111 aa28.53■■■□□ 2.16
PRKCH-216ENST00000555542 SART3Q15020 963 aaKnown RBP28.53■■■□□ 2.16
PRKCH-216ENST00000555542 BADQ92934 168 aa28.53■■■□□ 2.16
PRKCH-216ENST00000555542 ELP1O95163 1332 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 LOC102724159A0A0B4J2E5 919 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 SMPD1P17405 629 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 PDE4DQ08499 809 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 PWP2Q15269 919 aaKnown RBP28.52■■■□□ 2.16
PRKCH-216ENST00000555542 SEC23AQ15436 765 aa28.52■■■□□ 2.16
PRKCH-216ENST00000555542 LRIT3Q3SXY7 679 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms