RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PALM3A6NDB9 673 aaPredicted RBP15.97■□□□□ 0.15
SNX6-203ENST00000555416 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 ADCY6O43306 1168 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 BAATQ14032 418 aaPredicted RBP15.97■□□□□ 0.15
SNX6-203ENST00000555416 GRM4Q14833 912 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 ADCK5Q3MIX3 580 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 USH1GQ495M9 461 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 SLC30A10Q6XR72 485 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 ZNF467Q7Z7K2 595 aaPredicted RBP15.97■□□□□ 0.15
SNX6-203ENST00000555416 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
SNX6-203ENST00000555416 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.97■□□□□ 0.15
SNX6-203ENST00000555416 WDR19Q8NEZ3 1342 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 SYNGAP1Q96PV0 1343 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
SNX6-203ENST00000555416 PPP1R11O60927 126 aaPredicted RBP15.96■□□□□ 0.15
SNX6-203ENST00000555416 COL6A1P12109 1028 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 QRICH1Q2TAL8 776 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 ARMCX2Q7L311 632 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 NECAB2Q7Z6G3 386 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 TBC1D5Q92609 795 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 TCEANC2Q96MN5 208 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
SNX6-203ENST00000555416 ERICH2A1L162 156 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 CYTH3O43739 400 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 PTGS1P23219 599 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 IRX5P78411 483 aaPredicted RBP15.95■□□□□ 0.14
SNX6-203ENST00000555416 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
SNX6-203ENST00000555416 PRPF38BQ5VTL8 546 aaKnown RBP15.95■□□□□ 0.14
SNX6-203ENST00000555416 RAB11FIP4Q86YS3 637 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
SNX6-203ENST00000555416 DPF3Q92784 378 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 MTMR8Q96EF0 704 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 CEP290O15078 2479 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 DNAH12Q6ZR08 3092 aa15.95■□□□□ 0.14
SNX6-203ENST00000555416 BAZ2BQ9UIF8 2168 aaKnown RBP15.94■□□□□ 0.14
SNX6-203ENST00000555416 PTPDC1A2A3K4 754 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 H0YGN5 161 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 OPLAHO14841 1288 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
SNX6-203ENST00000555416 MSCO60682 206 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 PGK1P00558 417 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 CAPN2P17655 700 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 RXRAP19793 462 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 MCM5P33992 734 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 ACVR2BQ13705 512 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 SART3Q15020 963 aaKnown RBP15.94■□□□□ 0.14
SNX6-203ENST00000555416 ZNF654Q8IZM8 581 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 KCNB2Q92953 911 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 C11orf49Q9H6J7 331 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 NRBP1Q9UHY1 535 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
SNX6-203ENST00000555416 CNPY2Q9Y2B0 182 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 LRRC37A2A6NM11 1700 aa15.94■□□□□ 0.14
SNX6-203ENST00000555416 CPA1P15085 419 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 CALML3P27482 149 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 RPS6P62753 249 aaKnown RBP15.93■□□□□ 0.14
SNX6-203ENST00000555416 EXOSC10Q01780 885 aaKnown RBP15.93■□□□□ 0.14
SNX6-203ENST00000555416 LRRC41Q15345 812 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 TSGA10IPQ3SY00 556 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 TMEM63BQ5T3F8 832 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 NUP133Q8WUM0 1156 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 NEK1Q96PY6 1258 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 HTATIP2Q9BUP3 242 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 RIOX1Q9H6W3 641 aa15.93■□□□□ 0.14
SNX6-203ENST00000555416 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.92■□□□□ 0.14
SNX6-203ENST00000555416 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
SNX6-203ENST00000555416 AKR1A1P14550 325 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 LRRC26Q2I0M4 334 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 CCDC144BQ3MJ40 725 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 RNF20Q5VTR2 975 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 RNF207Q6ZRF8 634 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 CATIPQ7Z7H3 387 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 FBXO11Q86XK2 927 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 PIGSQ96S52 555 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 MTA3Q9BTC8 594 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 XPNPEP3Q9NQH7 507 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 PDGFCQ9NRA1 345 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 COL20A1Q9P218 1284 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 SNX14Q9Y5W7 946 aa15.92■□□□□ 0.14
SNX6-203ENST00000555416 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 DNM1LO00429 736 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 PLEKHA8P1O95397 391 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 RARBP10826 455 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 HSPA4P34932 840 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 ALDH5A1P51649 535 aaPredicted RBP15.91■□□□□ 0.14
SNX6-203ENST00000555416 EEPD1Q7L9B9 569 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 HOMER1Q86YM7 354 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 CMTR1Q8N1G2 835 aaKnown RBP15.91■□□□□ 0.14
SNX6-203ENST00000555416 MORC4Q8TE76 937 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 PIBF1Q8WXW3 757 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 SENP6Q9GZR1 1112 aaPredicted RBP15.91■□□□□ 0.14
SNX6-203ENST00000555416 ABHD16BQ9H3Z7 469 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 FAM184BQ9ULE4 1060 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 MYH6P13533 1939 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 ABCB11O95342 1321 aa15.91■□□□□ 0.14
SNX6-203ENST00000555416 ASB14A6NK59 587 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms