RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TRIM22Q8IYM9 498 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 MMGT1Q8N4V1 131 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 ZNF579Q8NAF0 562 aaKnown RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 CCDC47Q96A33 483 aaKnown RBP17.4■□□□□ 0.38
SYNE3-203ENST00000554873 SLC39A2Q9NP94 309 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
SYNE3-203ENST00000554873 ENO4A6NNW6 628 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 RAB27AP51159 221 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 BZW1Q7L1Q6 419 aaKnown RBP17.39■□□□□ 0.38
SYNE3-203ENST00000554873 CRACR2BQ8N4Y2 399 aaPredicted RBP17.39■□□□□ 0.38
SYNE3-203ENST00000554873 C3orf20Q8ND61 904 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 SPATA20Q8TB22 786 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 NSMCE1Q8WV22 266 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 CAVIN3Q969G5 261 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 CYFIP2Q96F07 1278 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 OSBPL7Q9BZF2 842 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 CNNM2Q9H8M5 875 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 TRPC6Q9Y210 931 aa17.39■□□□□ 0.38
SYNE3-203ENST00000554873 NR1D1P20393 614 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 C2orf54Q08AI8 447 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 EHBP1Q8NDI1 1231 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 SPAG5Q96R06 1193 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 KRT23Q9C075 422 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 CSRNP2Q9H175 543 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 PDE2AO00408 941 aaPredicted RBP17.39■□□□□ 0.37
SYNE3-203ENST00000554873 BUB1BO60566 1050 aaPredicted RBP17.39■□□□□ 0.37
SYNE3-203ENST00000554873 SLMAPQ14BN4 828 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 SPATA1Q5VX52 437 aa17.39■□□□□ 0.37
SYNE3-203ENST00000554873 REXO2Q9Y3B8 237 aaKnown RBP17.39■□□□□ 0.37
SYNE3-203ENST00000554873 EPN1Q9Y6I3 576 aaPredicted RBP17.39■□□□□ 0.37
SYNE3-203ENST00000554873 E7EVH7 732 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 SNAP23O00161 211 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 ATP6V1G2O95670 118 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 LACTB2Q53H82 288 aaPredicted RBP17.38■□□□□ 0.37
SYNE3-203ENST00000554873 MIS18BP1Q6P0N0 1132 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 NOD2Q9HC29 1040 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 TRMT112Q9UI30 125 aaKnown RBP17.38■□□□□ 0.37
SYNE3-203ENST00000554873 LRP6O75581 1613 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 NDUFA10O95299 355 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 FGFR2P21802 821 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 SCTRP47872 440 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 WTAPQ15007 396 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 KANK3Q6NY19 840 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 LPIN2Q92539 896 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 CUL5Q93034 780 aa17.38■□□□□ 0.37
SYNE3-203ENST00000554873 NID2Q14112 1375 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 SEMA3EO15041 775 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 SMNDC1O75940 238 aaKnown RBP eCLIP17.37■□□□□ 0.37
SYNE3-203ENST00000554873 DEXIO95424 95 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 STARD3NLO95772 234 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
SYNE3-203ENST00000554873 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
SYNE3-203ENST00000554873 PIGBQ92521 554 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 OPLAHO14841 1288 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 KRT14P02533 472 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 TRIM14Q14142 442 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 SPRED3Q2MJR0 410 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 PPP4R3AQ6IN85 833 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 CADPS2Q86UW7 1296 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 P3H4Q92791 437 aa17.37■□□□□ 0.37
SYNE3-203ENST00000554873 ANO9A1A5B4 782 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 DNAJC8O75937 253 aaPredicted RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 MYO1EQ12965 1108 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 CDKAL1Q5VV42 579 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 PAIP2Q9BPZ3 127 aaKnown RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 DMGDHQ9UI17 866 aaKnown RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 CORO1CQ9ULV4 474 aaPredicted RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 C15orf41Q9Y2V0 281 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 A0A087X0B3 334 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 ERICH2A1L162 156 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 RBM5P52756 815 aaKnown RBP eCLIP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 ITIH3Q06033 890 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 SNX1Q13596 522 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 CCDC122Q5T0U0 273 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 DRAXINQ8NBI3 349 aaPredicted RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 TBC1D31Q96DN5 1066 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 STAMBPL1Q96FJ0 436 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 NUP88Q99567 741 aaPredicted RBP17.36■□□□□ 0.37
SYNE3-203ENST00000554873 HINFPQ9BQA5 517 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
SYNE3-203ENST00000554873 ZNF185O15231 689 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 PDE8AO60658 829 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 STX17P56962 302 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 LCORLQ8N3X6 602 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 C1orf131Q8NDD1 294 aaKnown RBP17.35■□□□□ 0.37
SYNE3-203ENST00000554873 HDAC7Q8WUI4 952 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 SHISA4Q96DD7 197 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 EPSTI1Q96J88 318 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 LRRC1Q9BTT6 524 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 POLD4Q9HCU8 107 aa17.35■□□□□ 0.37
SYNE3-203ENST00000554873 CEP131Q9UPN4 1083 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms