RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZHX1Q9UKY1 873 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-211ENST00000554310 ASB14A6NK59 587 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 KBTBD13C9JR72 458 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 H0YGN5 161 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 NFIBO00712 420 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 DHX16O60231 1041 aaKnown RBP15.23■□□□□ 0.03
SHMT2-211ENST00000554310 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-211ENST00000554310 GRM4Q14833 912 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 ADGRF4Q8IZF3 695 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 MAF1Q9H063 256 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 CPVLQ9H3G5 476 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 XPNPEP3Q9NQH7 507 aa15.23■□□□□ 0.03
SHMT2-211ENST00000554310 ADD3Q9UEY8 706 aaKnown RBP15.23■□□□□ 0.03
SHMT2-211ENST00000554310 ABCB11O95342 1321 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 SOWAHBA6NEL2 793 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 KLRF2D3W0D1 207 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 MCM5P33992 734 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
SHMT2-211ENST00000554310 ANO1Q5XXA6 986 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 CLEC4DQ8WXI8 215 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 FAM184BQ9ULE4 1060 aa15.22■□□□□ 0.03
SHMT2-211ENST00000554310 TRIOBPQ9H2D6 2365 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 ASTN1O14525 1302 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-211ENST00000554310 PRC1O43663 620 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 TROAPQ12815 778 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 BAATQ14032 418 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-211ENST00000554310 QRICH1Q2TAL8 776 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 USH1GQ495M9 461 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 GJC2Q5T442 439 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-211ENST00000554310 SLC30A10Q6XR72 485 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 RNF207Q6ZRF8 634 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 CATIPQ7Z7H3 387 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 RNF180Q86T96 592 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 STAG2Q8N3U4 1231 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 IGDCC4Q8TDY8 1250 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 BACH2Q9BYV9 841 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 KATNBL1Q9H079 304 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 JMJD4Q9H9V9 463 aa15.21■□□□□ 0.03
SHMT2-211ENST00000554310 DDAH1O94760 285 aa15.2■□□□□ 0.02
SHMT2-211ENST00000554310 LRRC41Q15345 812 aa15.2■□□□□ 0.02
SHMT2-211ENST00000554310 RGS22Q8NE09 1264 aa15.2■□□□□ 0.02
SHMT2-211ENST00000554310 MORC4Q8TE76 937 aa15.2■□□□□ 0.02
SHMT2-211ENST00000554310 MPHOSPH6Q99547 160 aaKnown RBP15.2■□□□□ 0.02
SHMT2-211ENST00000554310 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
SHMT2-211ENST00000554310 SENP2Q9HC62 589 aa15.2■□□□□ 0.02
SHMT2-211ENST00000554310 SYNRGQ9UMZ2 1314 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 SH2B2O14492 632 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 ADAMTS4O75173 837 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 DUSP11O75319 330 aaKnown RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 CALML3P27482 149 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 ALDH5A1P51649 535 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 RPS6P62753 249 aaKnown RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 CCDC144BQ3MJ40 725 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 FBXO11Q86XK2 927 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 C7orf61Q8IZ16 206 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 TMTC2Q8N394 836 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 LENG1Q96BZ8 264 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 MTMR8Q96EF0 704 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 MAP3K14Q99558 947 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-211ENST00000554310 VTA1Q9NP79 307 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 PHF24Q9UPV7 400 aa15.19■□□□□ 0.02
SHMT2-211ENST00000554310 ZBTB5O15062 677 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 PGK1P00558 417 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 CST5P28325 142 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-211ENST00000554310 KIF5BP33176 963 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 LIFRP42702 1097 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 TRAF1Q13077 416 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 KRT32Q14532 448 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 LRRC26Q2I0M4 334 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 TSGA10IPQ3SY00 556 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 DNERQ8NFT8 737 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-211ENST00000554310 RIOX1Q9H6W3 641 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 SPC25Q9HBM1 224 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 VAT1LQ9HCJ6 419 aa15.18■□□□□ 0.02
SHMT2-211ENST00000554310 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
SHMT2-211ENST00000554310 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
SHMT2-211ENST00000554310 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 B4DLN1 442 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 ADCY6O43306 1168 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 REC8O95072 547 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 MRPL12P52815 198 aaKnown RBP15.17■□□□□ 0.02
SHMT2-211ENST00000554310 NFXL1Q6ZNB6 911 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms