RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 LRRC8CQ8TDW0 803 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 MRPS27Q92552 414 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 GMNCA6NCL1 334 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 SRGAP2O75044 1071 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PLA2G4DQ86XP0 818 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 CFAP61Q8NHU2 1237 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PHF20L1A8MW92 1017 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 FSBPO95073 299 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CACNA2D1P54289 1103 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 E4F1Q66K89 784 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 ENAHQ8N8S7 591 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CAPSLQ8WWF8 208 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CORO1BQ9BR76 489 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 SUN2Q9UH99 717 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CDHR2Q9BYE9 1310 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 RSPH10B2B2RC85 870 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 XPOTO43592 962 aaKnown RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 GIGYF1O75420 1035 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 RSPH10BP0C881 870 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 KRT5P13647 590 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CDC25BP30305 580 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CCDC102BQ68D86 513 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 ATL3Q6DD88 541 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 NFRKBQ6P4R8 1299 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 C12orf4Q9NQ89 552 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 SLC5A4Q9NY91 659 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 LSP1P33241 339 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 HAND2P61296 217 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 APPL2Q8NEU8 664 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CCDC127Q96BQ5 260 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 SLC12A5Q9H2X9 1139 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 IP6K2Q9UHH9 426 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 FOSL2P15408 326 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 UBXN1Q04323 297 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 ISLR2Q6UXK2 745 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 OLFM3Q96PB7 478 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 SEC24DO94855 1032 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 MTIF2P46199 727 aaKnown RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 PLIN5Q00G26 463 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 LRP8Q14114 963 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 TOGARAM2Q6ZUX3 1019 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 OR8K1Q8NGG5 319 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CYFIP2Q96F07 1278 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 HAUS7Q99871 368 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 CROTQ9UKG9 612 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 HPCAL4Q9UM19 191 aa9.83□□□□□ -0.84
GTF2A1-203ENST00000553612 P4HA1P13674 534 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 STIP1P31948 543 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 CYP26C1Q6V0L0 522 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 NUP58Q9BVL2 599 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 NUP85Q9BW27 656 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 CUTAO60888 179 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.842e-20■■■■□ 25.4
GTF2A1-203ENST00000553612 MRPL28Q13084 256 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 LBRQ14739 615 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 IFT20Q8IY31 132 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 TRIML2Q8N7C3 387 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SEPT8Q92599 483 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 RRP36Q96EU6 259 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 GOLGA8MH3BSY2 632 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 IGF2BP3O00425 579 aaKnown RBP eCLIP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 GJC1P36383 396 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 RAP1GDS1P52306 607 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 MCL1Q07820 350 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 DHX9Q08211 1270 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 PALB2Q86YC2 1186 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SCUBE1Q8IWY4 988 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 NACAP1Q9BZK3 213 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 KLHL14Q9P2G3 628 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 NOVA2Q9UNW9 492 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SAR1BQ9Y6B6 198 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 RRBP1Q9P2E9 1410 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 MAN1A2O60476 641 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 CCZ1BP86790 482 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 CCZ1P86791 482 aaPredicted RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 LRRC36Q1X8D7 754 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 TTC16Q8NEE8 873 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 LZICQ8WZA0 190 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SEC16BQ96JE7 1060 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 RPAP3Q9H6T3 665 aaPredicted RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 SH2B1Q9NRF2 756 aaPredicted RBP9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 RMND1Q9NWS8 449 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 ATP11BQ9Y2G3 1177 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 ZDHHC9Q9Y397 364 aa9.82□□□□□ -0.84
GTF2A1-203ENST00000553612 HNRNPCL2B2RXH8 293 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 HNRNPCL1O60812 293 aaKnown RBP9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 TPPPO94811 219 aa9.81□□□□□ -0.84
GTF2A1-203ENST00000553612 PRLP01236 227 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms