RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 BACH1O14867 736 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 NBNO60934 754 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TMEM127O75204 238 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 CD53P19397 219 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 RANBP1P43487 201 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 NCBP1Q09161 790 aaKnown RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 TRIM28Q13263 835 aaKnown RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 PDCD2Q16342 344 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 MUM1L1Q5H9M0 696 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 SOGA3Q5TF21 947 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 IL31Q6EBC2 164 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 PHLDB3Q6NSJ2 640 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 CHD1LQ86WJ1 897 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.56□□□□□ -1.68
RDH11-204ENST00000553578 PIBF1Q8WXW3 757 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TRIM11Q96F44 468 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 IER2Q9BTL4 223 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 SLC52A2Q9HAB3 445 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ZNF446Q9NWS9 450 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 RABL2BQ9UNT1 228 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 CDKL5O76039 1030 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 CCDC175P0C221 793 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 LMAN1P49257 510 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ATP8B2P98198 1209 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 CCDC15Q0P6D6 951 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ACAP2Q15057 778 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TLR1Q15399 786 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 PLEKHG6Q3KR16 790 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 PI16Q6UXB8 463 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TNS4Q8IZW8 715 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 CCDC112Q8NEF3 446 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ZNF397Q8NF99 534 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 CCDC26Q8TAB7 109 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 BICD1Q96G01 975 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 GPR101Q96P66 508 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 ZSCAN10Q96SZ4 725 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 PPT2Q9UMR5 302 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TNNQ9UQP3 1299 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.56□□□□□ -1.68
RDH11-204ENST00000553578 GJA3Q9Y6H8 435 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ABCC12Q96J65 1359 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TPP2P29144 1249 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 GPC1P35052 558 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 GUCY2FP51841 1108 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 NUCB2P80303 420 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 FKBP5Q13451 457 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 LARGE2Q8N3Y3 721 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ANKRD24Q8TF21 1146 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 N4BP2L2Q92802 583 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 GPRASP2Q96D09 838 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 AGAP3Q96P47 875 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ESYT1Q9BSJ8 1104 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 PLA2G12BQ9BX93 195 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 TTC12Q9H892 705 aaPredicted RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 MYH15Q9Y2K3 1946 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 RTL9Q8NET4 1388 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 FAM83GA6ND36 823 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 HMOX1P09601 288 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 GDF10P55107 478 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 RELL1Q8IUW5 271 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 PLEKHM2Q8IWE5 1019 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 MIEF2Q96C03 454 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 ZNF408Q9H9D4 720 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 FRMD3A2A2Y4 597 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 XBP1P17861 261 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 BDNFP23560 247 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 RRM1P23921 792 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 ADD2P35612 726 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 NFX1Q12986 1120 aaKnown RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 PTK7Q13308 1070 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 PRPF4BQ13523 1007 aaKnown RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 DHX8Q14562 1220 aaKnown RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 GRAMD1BQ3KR37 738 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 IQSEC1Q6DN90 963 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 TMCO3Q6UWJ1 677 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 KIAA0825Q8IV33 1275 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 TRIM42Q8IWZ5 723 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 SUGP1Q8IWZ8 645 aaKnown RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 TEX11Q8IYF3 940 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 CMTR1Q8N1G2 835 aaKnown RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 APOL5Q9BWW9 433 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 ALDH8A1Q9H2A2 487 aaPredicted RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 SLAIN2Q9P270 581 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 MCM8Q9UJA3 840 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 DNMT3LQ9UJW3 386 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 USP20Q9Y2K6 914 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 V9GYY5 206 aaPredicted RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 AKAP11Q9UKA4 1901 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 BCL9LQ86UU0 1499 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 PCDH11XQ9BZA7 1347 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 PCDH11YQ9BZA8 1340 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 ANKRD65E5RJM6 399 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 NAT2P11245 290 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 RHOQP17081 205 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 AMPHP49418 695 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 CDR1P51861 262 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 NEK3P51956 506 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 TTC30AQ86WT1 665 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms