RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 NFE2L3Q9Y4A8 694 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 CASP1P29466 404 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 DPYDQ12882 1025 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 CABP7Q86V35 215 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 SPATA20Q8TB22 786 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 CCDC47Q96A33 483 aaKnown RBP17.53■□□□□ 0.4
SCN8A-206ENST00000550891 CALML4Q96GE6 196 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
SCN8A-206ENST00000550891 MYH4Q9Y623 1939 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 BMP6P22004 513 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 ERCC5P28715 1186 aaPredicted RBP17.52■□□□□ 0.4
SCN8A-206ENST00000550891 TECP42680 631 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 AMNQ9BXJ7 453 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 CCSER1Q9C0I3 900 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 GOPCQ9HD26 462 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 PP2D1A8MPX8 630 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 DHX8Q14562 1220 aaKnown RBP17.52■□□□□ 0.4
SCN8A-206ENST00000550891 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCN8A-206ENST00000550891 E2F4Q16254 413 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 CT47A1Q5JQC4 288 aaPredicted RBP17.52■□□□□ 0.4
SCN8A-206ENST00000550891 ENOX1Q8TC92 643 aaKnown RBP17.52■□□□□ 0.4
SCN8A-206ENST00000550891 PLIN2Q99541 437 aa17.52■□□□□ 0.4
SCN8A-206ENST00000550891 NAP1L4Q99733 375 aaKnown RBP17.52■□□□□ 0.4
SCN8A-206ENST00000550891 ATP1A3P13637 1013 aa17.52■□□□□ 0.39
SCN8A-206ENST00000550891 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.39
SCN8A-206ENST00000550891 SYDE2Q5VT97 1194 aa17.52■□□□□ 0.39
SCN8A-206ENST00000550891 TMC6Q7Z403 805 aa17.52■□□□□ 0.39
SCN8A-206ENST00000550891 FBXO11Q86XK2 927 aa17.52■□□□□ 0.39
SCN8A-206ENST00000550891 SPICE1Q8N0Z3 855 aa17.52■□□□□ 0.39
SCN8A-206ENST00000550891 SH2D4AQ9H788 454 aa17.52■□□□□ 0.39
SCN8A-206ENST00000550891 PPP1R11O60927 126 aaPredicted RBP17.51■□□□□ 0.39
SCN8A-206ENST00000550891 PDXDC2PQ6P474 469 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 FAM83AQ86UY5 434 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
SCN8A-206ENST00000550891 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 TMEM39BQ9GZU3 492 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 KCNF1Q9H3M0 494 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 IMPACTQ9P2X3 320 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 OFD1O75665 1012 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 TRAF1Q13077 416 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 MIGA2Q7L4E1 593 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 MYOZ2Q9NPC6 264 aa17.51■□□□□ 0.39
SCN8A-206ENST00000550891 HSP90AA4PQ58FG1 418 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 SIAH1Q8IUQ4 282 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 CUEDC2Q9H467 287 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 SYNPO2Q9UMS6 1093 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 TNFAIP1Q13829 316 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 USH1GQ495M9 461 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 LRWD1Q9UFC0 647 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 ZBTB21Q9ULJ3 1066 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 TDP2O95551 362 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 GCFC2P16383 781 aaKnown RBP17.5■□□□□ 0.39
SCN8A-206ENST00000550891 LRMPQ12912 555 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
SCN8A-206ENST00000550891 SYNRGQ9UMZ2 1314 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 WNT10BO00744 389 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 STAT2P52630 851 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 AMPD3Q01432 767 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 CUL4BQ13620 913 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 MCTP2Q6DN12 878 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 MAGEF1Q9HAY2 307 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
SCN8A-206ENST00000550891 RPN1P04843 607 aaKnown RBP17.49■□□□□ 0.39
SCN8A-206ENST00000550891 MYL1P05976 194 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
SCN8A-206ENST00000550891 KIAA1524Q8TCG1 905 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 PYCARDQ9ULZ3 195 aa17.49■□□□□ 0.39
SCN8A-206ENST00000550891 STX17P56962 302 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 FMR1Q06787 632 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 CACTINQ8WUQ7 758 aaKnown RBP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 GJA3Q9Y6H8 435 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 SPDYE3A6NKU9 549 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L15C9J2P7 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L13C9JLJ4 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L11C9JVI0 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L18D6R9N7 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L22D6RA61 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L17D6RBQ6 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L19D6RCP7 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L20D6RJB6 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 SFPQP23246 707 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L24Q0WX57 530 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 STIM1Q13586 685 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 C17orf53Q8N3J3 647 aaPredicted RBP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 FEZ1Q99689 392 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 GREB1LQ9C091 1923 aaPredicted RBP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 PLCG1P19174 1290 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 RPS12P25398 132 aaKnown RBP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 MMP14P50281 582 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 SNAP25P60880 206 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 KRT79Q5XKE5 535 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 PPP4R3AQ6IN85 833 aa17.48■□□□□ 0.39
SCN8A-206ENST00000550891 SMYD4Q8IYR2 804 aaPredicted RBP17.48■□□□□ 0.39
SCN8A-206ENST00000550891 CCDC150Q8NCX0 1101 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms