RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-207ENST00000550504 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 CCDC12Q8WUD4 166 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-207ENST00000550504 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 ZNF214Q9UL59 606 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-207ENST00000550504 ZDHHC9Q9Y397 364 aa11.83□□□□□ -0.52
RAB5C-207ENST00000550504 ADAMTS3O15072 1205 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 CAPN15O75808 1086 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-207ENST00000550504 KRT2P35908 639 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 STAT3P40763 770 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 ADCY7P51828 1080 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 NUCB2P80303 420 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 SAFBQ15424 915 aaKnown RBP eCLIP11.82□□□□□ -0.52
RAB5C-207ENST00000550504 MUM1L1Q5H9M0 696 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
RAB5C-207ENST00000550504 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 GTF3C2Q8WUA4 911 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-207ENST00000550504 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 SPATC1LQ9H0A9 340 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 ZMYND12Q9H0C1 365 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 RNF146Q9NTX7 359 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 CPA4Q9UI42 421 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-207ENST00000550504 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
RAB5C-207ENST00000550504 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
RAB5C-207ENST00000550504 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 BTBD18B2RXH4 712 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 KIF28PB7ZC32 967 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 NFIBO00712 420 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 OPLAHO14841 1288 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 ATP2A1O14983 1001 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 BRD1O95696 1058 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 CFBP00751 764 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 CALML3P27482 149 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 GNA11P29992 359 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-207ENST00000550504 NR5A1Q13285 461 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 NPY5RQ15761 445 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 UBE2SQ16763 222 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 Q3C1V9 767 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 BLIDQ8IZY5 108 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 RASGRP4Q8TDF6 673 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 TBC1D5Q92609 795 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 MOV10L1Q9BXT6 1211 aaKnown RBP11.81□□□□□ -0.52
RAB5C-207ENST00000550504 PSTPIP2Q9H939 334 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 ZCCHC17Q9NP64 241 aaKnown RBP11.81□□□□□ -0.52
RAB5C-207ENST00000550504 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-207ENST00000550504 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 PCDHA4Q9UN74 947 aa11.81□□□□□ -0.52
RAB5C-207ENST00000550504 F13A1P00488 732 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
RAB5C-207ENST00000550504 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-207ENST00000550504 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
RAB5C-207ENST00000550504 ERVK-9P63128 1117 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 ERVK-24P63145 666 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 RESTQ13127 1097 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 FOXD4L6Q3SYB3 417 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-207ENST00000550504 NOM1Q5C9Z4 860 aaKnown RBP11.8□□□□□ -0.52
RAB5C-207ENST00000550504 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 JAKMIP3Q5VZ66 844 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 USP17L6PQ6QN14 398 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 FOXD4L3Q6VB84 417 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-207ENST00000550504 NSMFQ6X4W1 530 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 NCAPG2Q86XI2 1143 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 RIOX2Q8IUF8 465 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 DAGLBQ8NCG7 672 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 BICD2Q8TD16 824 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 CLEC4DQ8WXI8 215 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 CUL5Q93034 780 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 ZFYVE28Q9HCC9 887 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
RAB5C-207ENST00000550504 THSD7BQ9C0I4 1608 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-207ENST00000550504 ERCC3P19447 782 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 MAP2K2P36507 400 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 CRHR2Q13324 411 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 TKFCQ3LXA3 575 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 GALNT17Q6IS24 598 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-207ENST00000550504 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-207ENST00000550504 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
RAB5C-207ENST00000550504 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms