RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 CCDC85CA6NKD9 419 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 MUM1L1Q5H9M0 696 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 ZNF467Q7Z7K2 595 aaPredicted RBP20.29■□□□□ 0.84
CDK4-207ENST00000550419 MICU3Q86XE3 530 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 FBXO11Q86XK2 927 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 CLEC4DQ8WXI8 215 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 BRF1Q92994 677 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 AMNQ9BXJ7 453 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 ALDH8A1Q9H2A2 487 aaPredicted RBP20.29■□□□□ 0.84
CDK4-207ENST00000550419 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 A1CFQ9NQ94 594 aaKnown RBP20.29■□□□□ 0.84
CDK4-207ENST00000550419 CENPFP49454 3210 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 NID2Q14112 1375 aa20.29■□□□□ 0.84
CDK4-207ENST00000550419 PNMA6FA0A0J9YX94 578 aa20.28■□□□□ 0.84
CDK4-207ENST00000550419 PGK2P07205 417 aa20.28■□□□□ 0.84
CDK4-207ENST00000550419 CAPN2P17655 700 aa20.28■□□□□ 0.84
CDK4-207ENST00000550419 MFSD14CQ5VZR4 134 aa20.28■□□□□ 0.84
CDK4-207ENST00000550419 TMTC3Q6ZXV5 915 aa20.28■□□□□ 0.84
CDK4-207ENST00000550419 FLRT1Q9NZU1 646 aa20.28■□□□□ 0.84
CDK4-207ENST00000550419 RPTORQ8N122 1335 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 CCL5P13501 91 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 RXRAP19793 462 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 MAMDC4Q6UXC1 1216 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
CDK4-207ENST00000550419 FAM133AQ8N9E0 248 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 PIGSQ96S52 555 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 TMEM106CQ9BVX2 250 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 UPF3BQ9BZI7 483 aaKnown RBP20.27■□□□□ 0.84
CDK4-207ENST00000550419 CYP39A1Q9NYL5 469 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 NRBP1Q9UHY1 535 aa20.27■□□□□ 0.84
CDK4-207ENST00000550419 MRPL11Q9Y3B7 192 aaKnown RBP20.27■□□□□ 0.84
CDK4-207ENST00000550419 ZNFX1Q9P2E3 1918 aaKnown RBP20.27■□□□□ 0.84
CDK4-207ENST00000550419 NFIBO00712 420 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 PLEKHA8P1O95397 391 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 CACNB2Q08289 660 aaPredicted RBP20.26■□□□□ 0.83
CDK4-207ENST00000550419 APOBRQ0VD83 1088 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 TOB2Q14106 344 aaPredicted RBP20.26■□□□□ 0.83
CDK4-207ENST00000550419 MTFR1Q15390 333 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 RTN1Q16799 776 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 USH1GQ495M9 461 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 RRP36Q96EU6 259 aaKnown RBP20.26■□□□□ 0.83
CDK4-207ENST00000550419 TINF2Q9BSI4 451 aa20.26■□□□□ 0.83
CDK4-207ENST00000550419 HMX1Q9NP08 348 aaPredicted RBP20.26■□□□□ 0.83
CDK4-207ENST00000550419 PAK6Q9NQU5 681 aaPredicted RBP20.26■□□□□ 0.83
CDK4-207ENST00000550419 LOC102724159A0A0B4J2E5 919 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 PPP1R11O60927 126 aaPredicted RBP20.25■□□□□ 0.83
CDK4-207ENST00000550419 GJB1P08034 283 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 PRKAR2AP13861 404 aaKnown RBP20.25■□□□□ 0.83
CDK4-207ENST00000550419 GHRHRQ02643 423 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 TRIM32Q13049 653 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 PWP2Q15269 919 aaKnown RBP20.25■□□□□ 0.83
CDK4-207ENST00000550419 MCF2L2Q86YR7 1114 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 CCDC144CPQ8IYA2 1237 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 SAMD3Q8N6K7 520 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 ZNF274Q96GC6 653 aaPredicted RBP20.25■□□□□ 0.83
CDK4-207ENST00000550419 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
CDK4-207ENST00000550419 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 RBBP6Q7Z6E9 1792 aaKnown RBP20.25■□□□□ 0.83
CDK4-207ENST00000550419 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
CDK4-207ENST00000550419 GOLGA8AA7E2F4 631 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 GOLGA8BA8MQT2 603 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 CYP2C19P33261 490 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 METAP2P50579 478 aaKnown RBP eCLIP20.24■□□□□ 0.836e-6■■■■□ 19.7
CDK4-207ENST00000550419 FUT2Q10981 343 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 NSMFQ6X4W1 530 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 FGD4Q96M96 766 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 RNF208Q9H0X6 261 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 UNC93B1Q9H1C4 597 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 MAP3K20Q9NYL2 800 aaKnown RBP20.24■□□□□ 0.83
CDK4-207ENST00000550419 SEC63Q9UGP8 760 aaKnown RBP20.24■□□□□ 0.83
CDK4-207ENST00000550419 PCDHA1Q9Y5I3 950 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 PLXNA1Q9UIW2 1896 aa20.24■□□□□ 0.83
CDK4-207ENST00000550419 SMCHD1A6NHR9 2005 aa20.23■□□□□ 0.83
CDK4-207ENST00000550419 TAL1P17542 331 aaPredicted RBP20.23■□□□□ 0.83
CDK4-207ENST00000550419 PDIA3P30101 505 aaKnown RBP20.23■□□□□ 0.83
CDK4-207ENST00000550419 RBM25P49756 843 aaKnown RBP20.23■□□□□ 0.83
CDK4-207ENST00000550419 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
CDK4-207ENST00000550419 ANKRD1Q15327 319 aa20.23■□□□□ 0.83
CDK4-207ENST00000550419 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDK4-207ENST00000550419 ADD3Q9UEY8 706 aaKnown RBP20.23■□□□□ 0.83
CDK4-207ENST00000550419 CYBAP13498 195 aa20.22■□□□□ 0.83
CDK4-207ENST00000550419 CDC27P30260 824 aa20.22■□□□□ 0.83
CDK4-207ENST00000550419 RPS6P62753 249 aaKnown RBP20.22■□□□□ 0.83
CDK4-207ENST00000550419 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
CDK4-207ENST00000550419 C22orf23Q9BZE7 217 aa20.22■□□□□ 0.83
CDK4-207ENST00000550419 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
CDK4-207ENST00000550419 CNTNAP5Q8WYK1 1306 aa20.22■□□□□ 0.83
CDK4-207ENST00000550419 MYH6P13533 1939 aa20.21■□□□□ 0.83
CDK4-207ENST00000550419 PTPDC1A2A3K4 754 aa20.21■□□□□ 0.83
CDK4-207ENST00000550419 SOWAHBA6NEL2 793 aa20.21■□□□□ 0.83
CDK4-207ENST00000550419 ASB14A6NK59 587 aa20.21■□□□□ 0.83
CDK4-207ENST00000550419 OPLAHO14841 1288 aa20.21■□□□□ 0.83
CDK4-207ENST00000550419 GJA8P48165 433 aa20.21■□□□□ 0.83
CDK4-207ENST00000550419 CMTR1Q8N1G2 835 aaKnown RBP20.21■□□□□ 0.83
CDK4-207ENST00000550419 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms