RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CAPN2P17655 700 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 CYP2B6P20813 491 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 NFXL1Q6ZNB6 911 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 SRBD1Q8N5C6 995 aaKnown RBP13.84□□□□□ -0.19
PFDN5-208ENST00000549995 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 BRF1Q92994 677 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 CHMP4CQ96CF2 233 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 MAML3Q96JK9 1138 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 SLC5A4Q9NY91 659 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
PFDN5-208ENST00000549995 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 BRCA2P51587 3418 aa13.83□□□□□ -0.19
PFDN5-208ENST00000549995 OPLAHO14841 1288 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-208ENST00000549995 PLEKHA8P1O95397 391 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 INHAP05111 366 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 ALAS1P13196 640 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 ELNP15502 786 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 SNAP25P60880 206 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 TRAF1Q13077 416 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 CCL14Q16627 93 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 MORC4Q8TE76 937 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 SH3TC2Q8TF17 1288 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 NUP133Q8WUM0 1156 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-208ENST00000549995 KIF2CQ99661 725 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 UPF3BQ9BZI7 483 aaKnown RBP13.83□□□□□ -0.2
PFDN5-208ENST00000549995 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
PFDN5-208ENST00000549995 PAK6Q9NQU5 681 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-208ENST00000549995 CYP39A1Q9NYL5 469 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 FLRT1Q9NZU1 646 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 NRBP1Q9UHY1 535 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.2
PFDN5-208ENST00000549995 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 NFIBO00712 420 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 RXRAP19793 462 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 UBXN2AP68543 259 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 APOBRQ0VD83 1088 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 NTRK3Q16288 839 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 RTN1Q16799 776 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 DPP9Q86TI2 863 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 TEX2Q8IWB9 1127 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 PIGSQ96S52 555 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 MAP3K20Q9NYL2 800 aaKnown RBP13.82□□□□□ -0.2
PFDN5-208ENST00000549995 ASTN1O14525 1302 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 KIAA1217Q5T5P2 1943 aa13.82□□□□□ -0.2
PFDN5-208ENST00000549995 GOLGA8AA7E2F4 631 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 CYBAP13498 195 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 TAL1P17542 331 aaPredicted RBP13.81□□□□□ -0.2
PFDN5-208ENST00000549995 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
PFDN5-208ENST00000549995 CDC27P30260 824 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.2
PFDN5-208ENST00000549995 ANKRD35Q8N283 1001 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 PDRG1Q9NUG6 133 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
PFDN5-208ENST00000549995 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
PFDN5-208ENST00000549995 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 hCG_1984214I3L0E3 225 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 PGK2P07205 417 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 HSD17B4P51659 736 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-208ENST00000549995 TRIM32Q13049 653 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 ANKRD1Q15327 319 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 MTFR1Q15390 333 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 ZNF713Q8N859 430 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-208ENST00000549995 RRP36Q96EU6 259 aaKnown RBP13.8□□□□□ -0.2
PFDN5-208ENST00000549995 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 KATNBL1Q9H079 304 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 HOMER2Q9NSB8 354 aa13.8□□□□□ -0.2
PFDN5-208ENST00000549995 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
PFDN5-208ENST00000549995 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 GJB1P08034 283 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 CCL5P13501 91 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
PFDN5-208ENST00000549995 IFNAR1P17181 557 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 EDNRBP24530 442 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 FGD1P98174 961 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 PPP1R18Q6NYC8 613 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 MCF2L2Q86YR7 1114 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.2
PFDN5-208ENST00000549995 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 FRMPD4Q14CM0 1322 aa13.79□□□□□ -0.2
PFDN5-208ENST00000549995 DHX16O60231 1041 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms