RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 MICU3Q86XE3 530 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 FMNL3Q8IVF7 1028 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 VSTM4Q8IW00 320 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 MSL3Q8N5Y2 521 aaKnown RBP9.81□□□□□ -0.84
TMEM116-205ENST00000547878 KRI1Q8N9T8 703 aaKnown RBP9.81□□□□□ -0.84
TMEM116-205ENST00000547878 TRIML1Q8N9V2 468 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
TMEM116-205ENST00000547878 SH3TC2Q8TF17 1288 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.81□□□□□ -0.84
TMEM116-205ENST00000547878 KRT23Q9C075 422 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 FOXP1Q9H334 677 aaPredicted RBP9.81□□□□□ -0.84
TMEM116-205ENST00000547878 PRO3102Q9H379 93 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 EPB41L4AQ9HCS5 686 aaPredicted RBP9.81□□□□□ -0.84
TMEM116-205ENST00000547878 GJB4Q9NTQ9 266 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 PCDHAC2Q9Y5I4 1007 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 XDHP47989 1333 aa9.81□□□□□ -0.84
TMEM116-205ENST00000547878 B4E1Z4 1266 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 IDH1O75874 414 aaKnown RBP9.8□□□□□ -0.84
TMEM116-205ENST00000547878 MMP1P03956 469 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 PHKA1P46020 1223 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 CD151P48509 253 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 ETF1P62495 437 aaKnown RBP9.8□□□□□ -0.84
TMEM116-205ENST00000547878 TRAF1Q13077 416 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 RILPL1Q5EBL4 403 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 C1QTNF12Q5T7M4 302 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 TXNRD3Q86VQ6 643 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 APOBEC3FQ8IUX4 373 aaKnown RBP9.8□□□□□ -0.84
TMEM116-205ENST00000547878 OGFOD1Q8N543 542 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 KLHL23Q8NBE8 558 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 AIFM3Q96NN9 605 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 SRRTQ9BXP5 876 aaKnown RBP9.8□□□□□ -0.84
TMEM116-205ENST00000547878 ETAA1Q9NY74 926 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 DACH1Q9UI36 760 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 KCNH3Q9ULD8 1083 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 SLC12A7Q9Y666 1083 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 A0A1B0GUL6 1792 aa9.8□□□□□ -0.84
TMEM116-205ENST00000547878 GOLGA6L9A6NEM1 432 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 BIN1O00499 593 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SOX1O00570 391 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 RPS6KA5O75582 802 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TPM1P09493 284 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 H2AFXP16104 143 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 MDM2Q00987 491 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SSRP1Q08945 709 aaKnown RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 MAP3K12Q12852 859 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SART3Q15020 963 aaKnown RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 AKNAD1Q5T1N1 836 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 PACS2Q86VP3 889 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 KIAA0825Q8IV33 1275 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SPATA5Q8NB90 893 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TATDN2Q93075 761 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 NAPBQ9H115 298 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 DEFB129Q9H1M3 183 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TRMT1Q9NXH9 659 aaKnown RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 CUL9Q8IWT3 2517 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 ARHGAP6O43182 974 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 ATP1A3P13637 1013 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SLC5A1P13866 664 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 ZNF18P17022 549 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 PTPREP23469 700 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 ATP2B4P23634 1241 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 UBASH3AP57075 661 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 ICA1Q05084 483 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TBX2Q13207 712 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SAFBQ15424 915 aaKnown RBP eCLIP9.79□□□□□ -0.84
TMEM116-205ENST00000547878 FBXO38Q6PIJ6 1188 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TRIM22Q8IYM9 498 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 IFNL3Q8IZI9 196 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 MLKLQ8NB16 471 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 CNNM3Q8NE01 707 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 SPATA20Q8TB22 786 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 PHKBQ93100 1093 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 DENND2AQ9ULE3 1009 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 NUB1Q9Y5A7 615 aa9.79□□□□□ -0.84
TMEM116-205ENST00000547878 TRIM66O15016 1216 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 ZSCAN12O43309 604 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 DEXIO95424 95 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 KLRK1P26718 216 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 MAGEA8P43361 318 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 SARSP49591 514 aaKnown RBP9.78□□□□□ -0.84
TMEM116-205ENST00000547878 PNOCQ13519 176 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 ELF2Q15723 593 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 NBPF12Q5TAG4 269 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-205ENST00000547878 STRIP1Q5VSL9 837 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 KANK3Q6NY19 840 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 TMEM139Q8IV31 216 aa9.78□□□□□ -0.84
TMEM116-205ENST00000547878 EXOC8Q8IYI6 725 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms