RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CPVLQ9H3G5 476 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 HMX1Q9NP08 348 aaPredicted RBP20.25■□□□□ 0.83
CD9-211ENST00000546073 RBM27Q9P2N5 1060 aaKnown RBP20.25■□□□□ 0.83
CD9-211ENST00000546073 PCDHA1Q9Y5I3 950 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 ZNF536O15090 1300 aa20.25■□□□□ 0.83
CD9-211ENST00000546073 INHAP05111 366 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 CAPN2P17655 700 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 OLFML2BQ68BL8 750 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 CCDC82Q8N4S0 544 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 MSL3Q8N5Y2 521 aaKnown RBP20.24■□□□□ 0.83
CD9-211ENST00000546073 PIBF1Q8WXW3 757 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 USP6NLQ92738 828 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 CUL5Q93034 780 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 RNF208Q9H0X6 261 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 CNPY2Q9Y2B0 182 aa20.24■□□□□ 0.83
CD9-211ENST00000546073 PGK2P07205 417 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 CNGA1P29973 690 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 NEK4P51957 841 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 CAP1Q01518 475 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 RAB11FIP4Q86YS3 637 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 SAMD3Q8N6K7 520 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 ZNF333Q96JL9 665 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 PIGSQ96S52 555 aa20.23■□□□□ 0.83
CD9-211ENST00000546073 ASB14A6NK59 587 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 SEC24BO95487 1268 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 CALML3P27482 149 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 TMTC3Q6ZXV5 915 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.22■□□□□ 0.83
CD9-211ENST00000546073 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 ZNF274Q96GC6 653 aaPredicted RBP20.22■□□□□ 0.83
CD9-211ENST00000546073 MAP3K20Q9NYL2 800 aaKnown RBP20.22■□□□□ 0.83
CD9-211ENST00000546073 BRPF3Q9ULD4 1205 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 RPTORQ8N122 1335 aa20.22■□□□□ 0.83
CD9-211ENST00000546073 COBLO75128 1261 aa20.21■□□□□ 0.83
CD9-211ENST00000546073 CAPN15O75808 1086 aa20.21■□□□□ 0.83
CD9-211ENST00000546073 ZNF792Q3KQV3 632 aa20.21■□□□□ 0.83
CD9-211ENST00000546073 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
CD9-211ENST00000546073 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
CD9-211ENST00000546073 TRIB2Q92519 343 aa20.21■□□□□ 0.83
CD9-211ENST00000546073 MAML3Q96JK9 1138 aa20.21■□□□□ 0.83
CD9-211ENST00000546073 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
CD9-211ENST00000546073 A1CFQ9NQ94 594 aaKnown RBP20.21■□□□□ 0.83
CD9-211ENST00000546073 MSCO60682 206 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 CDKL5O76039 1030 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 PLEKHA8P1O95397 391 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 CCL5P13501 91 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
CD9-211ENST00000546073 BAATQ14032 418 aaPredicted RBP20.2■□□□□ 0.82
CD9-211ENST00000546073 MUM1L1Q5H9M0 696 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 NPLOC4Q8TAT6 608 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 TINF2Q9BSI4 451 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 AGXT2Q9BYV1 514 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 ALDH8A1Q9H2A2 487 aaPredicted RBP20.2■□□□□ 0.82
CD9-211ENST00000546073 CYP39A1Q9NYL5 469 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 NRBP1Q9UHY1 535 aa20.2■□□□□ 0.82
CD9-211ENST00000546073 ST18O60284 1047 aa20.19■□□□□ 0.82
CD9-211ENST00000546073 CFBP00751 764 aa20.19■□□□□ 0.82
CD9-211ENST00000546073 CCL14Q16627 93 aa20.19■□□□□ 0.82
CD9-211ENST00000546073 SRBD1Q8N5C6 995 aaKnown RBP20.19■□□□□ 0.82
CD9-211ENST00000546073 CCDC12Q8WUD4 166 aaPredicted RBP20.19■□□□□ 0.82
CD9-211ENST00000546073 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
CD9-211ENST00000546073 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
CD9-211ENST00000546073 LOC102724159A0A0B4J2E5 919 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 GCOM1H8Y6P7 765 aaPredicted RBP20.18■□□□□ 0.82
CD9-211ENST00000546073 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 TFRCP02786 760 aaKnown RBP20.18■□□□□ 0.82
CD9-211ENST00000546073 POLR2MP0CAP2 368 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 PDIA3P30101 505 aaKnown RBP20.18■□□□□ 0.82
CD9-211ENST00000546073 CYP2C19P33261 490 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 PWP2Q15269 919 aaKnown RBP20.18■□□□□ 0.82
CD9-211ENST00000546073 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
CD9-211ENST00000546073 DNERQ8NFT8 737 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 GLT8D2Q9H1C3 349 aa20.18■□□□□ 0.82
CD9-211ENST00000546073 DNAJC25-GNG10A0A024R161 153 aa20.17■□□□□ 0.82
CD9-211ENST00000546073 NFIBO00712 420 aa20.17■□□□□ 0.82
CD9-211ENST00000546073 RPS6P62753 249 aaKnown RBP20.17■□□□□ 0.82
CD9-211ENST00000546073 CCT2P78371 535 aaKnown RBP20.17■□□□□ 0.82
CD9-211ENST00000546073 CACNB2Q08289 660 aaPredicted RBP20.17■□□□□ 0.82
CD9-211ENST00000546073 STK3Q13188 491 aa20.17■□□□□ 0.82
CD9-211ENST00000546073 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
CD9-211ENST00000546073 SMARCC2Q8TAQ2 1214 aa20.17■□□□□ 0.82
CD9-211ENST00000546073 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.17■□□□□ 0.82
CD9-211ENST00000546073 V9GY48 417 aaPredicted RBP20.17■□□□□ 0.82
CD9-211ENST00000546073 SYNGAP1Q96PV0 1343 aa20.17■□□□□ 0.82
CD9-211ENST00000546073 MGAMO43451 1857 aa20.17■□□□□ 0.82
CD9-211ENST00000546073 RLFQ13129 1914 aa20.16■□□□□ 0.82
CD9-211ENST00000546073 CYTH3O43739 400 aa20.16■□□□□ 0.82
CD9-211ENST00000546073 GJB1P08034 283 aa20.16■□□□□ 0.82
CD9-211ENST00000546073 ADD1P35611 737 aaKnown RBP20.16■□□□□ 0.82
CD9-211ENST00000546073 RBM25P49756 843 aaKnown RBP20.16■□□□□ 0.82
CD9-211ENST00000546073 EVCP57679 992 aa20.16■□□□□ 0.82
CD9-211ENST00000546073 PDE4DQ08499 809 aa20.16■□□□□ 0.82
CD9-211ENST00000546073 SSRP1Q08945 709 aaKnown RBP20.16■□□□□ 0.82
CD9-211ENST00000546073 COL9A3Q14050 684 aaPredicted RBP20.16■□□□□ 0.82
CD9-211ENST00000546073 TOB2Q14106 344 aaPredicted RBP20.16■□□□□ 0.82
CD9-211ENST00000546073 RABEP1Q15276 862 aa20.16■□□□□ 0.82
CD9-211ENST00000546073 ARHGEF16Q5VV41 709 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms