RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 KBTBD13C9JR72 458 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 EML1O00423 815 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 GLRX3O76003 335 aaKnown RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 ABL1P00519 1130 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 NPR3P17342 541 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 NOS2P35228 1153 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 IRX3P78415 501 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 FOXO4P98177 505 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 MAP3K10Q02779 954 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 NFIAQ12857 509 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 ZNF211Q13398 564 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 SNX17Q15036 470 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 GRIK5Q16478 980 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 TREML2Q5T2D2 321 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 FOXD4L5Q5VV16 416 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 CDC42EP5Q6NZY7 148 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 LMBR1LQ6UX01 489 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 SLC39A5Q6ZMH5 540 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 PLEKHH3Q7Z736 793 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 ZSCAN29Q8IWY8 852 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 ZNF280CQ8ND82 737 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 HELQQ8TDG4 1101 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 RHBDD1Q8TEB9 315 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 VTI1AQ96AJ9 217 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 INSM2Q96T92 566 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 PCGF6Q9BYE7 350 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 OSBPL5Q9H0X9 879 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 ASCC2Q9H1I8 757 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-220ENST00000544550 AS3MTQ9HBK9 375 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 PDLIM7Q9NR12 457 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 USP40Q9NVE5 1235 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 TACC3Q9Y6A5 838 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 UTYO14607 1347 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 KIF16BQ96L93 1317 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 ATRNL1Q5VV63 1379 aa5.11□□□□□ -1.59
SNHG1-220ENST00000544550 SPATA31C2B4DYI2 1134 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 H3BRB1 525 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 MGAMO43451 1857 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 UPP2O95045 317 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 BMP1P13497 986 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 RAG1P15918 1043 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 CNGA1P29973 690 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 CTSOP43234 321 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 HMGCS2P54868 508 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 CCNA1P78396 465 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 FPGSQ05932 587 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 SPP2Q13103 211 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 WDR43Q15061 677 aaKnown RBP eCLIP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 TRIM60Q495X7 471 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 COX20Q5RI15 118 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 SH3PXD2AQ5TCZ1 1133 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 TMEM214Q6NUQ4 689 aaKnown RBP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 MAST2Q6P0Q8 1798 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 MRPL14Q6P1L8 145 aaKnown RBP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 C16orf46Q6P387 395 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 GPR142Q7Z601 462 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 CCDC146Q8IYE0 955 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 DNAAF4Q8WXU2 420 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 USP6NLQ92738 828 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 EDC3Q96F86 508 aaKnown RBP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 MYO19Q96H55 970 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 IDI2Q9BXS1 227 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 NIFKQ9BYG3 293 aaKnown RBP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 SPEF2Q9C093 1822 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 SAP130Q9H0E3 1048 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 KCNH6Q9H252 994 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 TUT1Q9H6E5 874 aaKnown RBP5.1□□□□□ -1.59
SNHG1-220ENST00000544550 ANO2Q9NQ90 1003 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 TMOD4Q9NZQ9 345 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 DAGLAQ9Y4D2 1042 aa5.1□□□□□ -1.59
SNHG1-220ENST00000544550 TRIM43BA6NCK2 446 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 PDE8BO95263 885 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 LDHBP07195 334 aaKnown RBP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 CLTBP09497 229 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 IFIT1P09914 478 aaKnown RBP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 HOXA7P31268 230 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 RGS3P49796 1198 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 MRE11P49959 708 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 HERVK_113P62684 666 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 ERVK-24P63145 666 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 ATP2B2Q01814 1243 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 MTMR3Q13615 1198 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 RAB30Q15771 203 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 CCL14Q16627 93 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 METTL24Q5JXM2 366 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 CCDC129Q6ZRS4 1044 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 GLYCTKQ8IVS8 523 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 ZGPATQ8N5A5 531 aaKnown RBP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 C8orf58Q8NAV2 365 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 HERVK_113Q902F9 699 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 TRIM43Q96BQ3 446 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 MTIF3Q9H2K0 278 aaKnown RBP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 PRDM12Q9H4Q4 367 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.09□□□□□ -1.59
SNHG1-220ENST00000544550 MSRAQ9UJ68 235 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 LRFN2Q9ULH4 789 aa5.09□□□□□ -1.59
SNHG1-220ENST00000544550 MYH3P11055 1940 aa5.09□□□□□ -1.6
SNHG1-220ENST00000544550 SLC15A5A6NIM6 579 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 PRR33A8MZF0 331 aa5.08□□□□□ -1.6
SNHG1-220ENST00000544550 C19orf81C9J6K1 198 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms