RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 MICU3Q86XE3 530 aa21.37■■□□□ 1.01
COPS7A-216ENST00000543170 MSL3Q8N5Y2 521 aaKnown RBP21.37■■□□□ 1.01
COPS7A-216ENST00000543170 CYP46A1Q9Y6A2 500 aa21.37■■□□□ 1.01
COPS7A-216ENST00000543170 LCTP09848 1927 aa21.37■■□□□ 1.01
COPS7A-216ENST00000543170 BRCA2P51587 3418 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 RPTORQ8N122 1335 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 BAZ2BQ9UIF8 2168 aaKnown RBP21.36■■□□□ 1.01
COPS7A-216ENST00000543170 ZBTB43O43298 467 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 CYTH3O43739 400 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 SEC24BO95487 1268 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 PGK2P07205 417 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 MTFR1Q15390 333 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 FBXO11Q86XK2 927 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 TMEM106CQ9BVX2 250 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 RBM28Q9NW13 759 aaKnown RBP21.36■■□□□ 1.01
COPS7A-216ENST00000543170 BRPF3Q9ULD4 1205 aa21.36■■□□□ 1.01
COPS7A-216ENST00000543170 KLF18A0A0U1RQI7 1052 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 CCL5P13501 91 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 PRKAR2AP13861 404 aaKnown RBP21.35■■□□□ 1.01
COPS7A-216ENST00000543170 TRAF1Q13077 416 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 PPP2R5BQ15173 497 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 CLEC4DQ8WXI8 215 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 BRF1Q92994 677 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 AMNQ9BXJ7 453 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 VAT1LQ9HCJ6 419 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 PAK6Q9NQU5 681 aaPredicted RBP21.35■■□□□ 1.01
COPS7A-216ENST00000543170 CYP39A1Q9NYL5 469 aa21.35■■□□□ 1.01
COPS7A-216ENST00000543170 NFIBO00712 420 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 TAL1P17542 331 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-216ENST00000543170 CAPN2P17655 700 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 RXRAP19793 462 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 EVCP57679 992 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 CACNB2Q08289 660 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-216ENST00000543170 TRIM32Q13049 653 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 TMTC3Q6ZXV5 915 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 FAM133AQ8N9E0 248 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.34■■□□□ 1.01
COPS7A-216ENST00000543170 UNC93B1Q9H1C4 597 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 HMX1Q9NP08 348 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-216ENST00000543170 NRBP1Q9UHY1 535 aa21.34■■□□□ 1.01
COPS7A-216ENST00000543170 SYNGAP1Q96PV0 1343 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 PNMA6FA0A0J9YX94 578 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 POTEB2H3BUK9 544 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 PLEKHA8P1O95397 391 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 GJB1P08034 283 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 RTN1Q16799 776 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 USH1GQ495M9 461 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 MAMDC4Q6UXC1 1216 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 FGD4Q96M96 766 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 PIGSQ96S52 555 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 TINF2Q9BSI4 451 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 RNF208Q9H0X6 261 aa21.33■■□□□ 1.01
COPS7A-216ENST00000543170 MRPL11Q9Y3B7 192 aaKnown RBP21.33■■□□□ 1.01
COPS7A-216ENST00000543170 FRMPD3Q5JV73 1810 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 GOLGA8AA7E2F4 631 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 GOLGA8BA8MQT2 603 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 PPP1R11O60927 126 aaPredicted RBP21.32■■□□□ 1
COPS7A-216ENST00000543170 CYBAP13498 195 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 SOX10P56693 466 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 APOBRQ0VD83 1088 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 NSMFQ6X4W1 530 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 HOMER1Q86YM7 354 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 CCDC144CPQ8IYA2 1237 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 SRBD1Q8N5C6 995 aaKnown RBP21.32■■□□□ 1
COPS7A-216ENST00000543170 RRP36Q96EU6 259 aaKnown RBP21.32■■□□□ 1
COPS7A-216ENST00000543170 UPF3BQ9BZI7 483 aaKnown RBP21.32■■□□□ 1
COPS7A-216ENST00000543170 LRRC37A2A6NM11 1700 aa21.32■■□□□ 1
COPS7A-216ENST00000543170 LOC102724159A0A0B4J2E5 919 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 CYP2C19P33261 490 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 GJA8P48165 433 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 METAP2P50579 478 aaKnown RBP eCLIP21.31■■□□□ 1
COPS7A-216ENST00000543170 GHRHRQ02643 423 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 TOB2Q14106 344 aaPredicted RBP21.31■■□□□ 1
COPS7A-216ENST00000543170 PWP2Q15269 919 aaKnown RBP21.31■■□□□ 1
COPS7A-216ENST00000543170 MCF2L2Q86YR7 1114 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 SAMD3Q8N6K7 520 aa21.31■■□□□ 1
COPS7A-216ENST00000543170 ALDH8A1Q9H2A2 487 aaPredicted RBP21.31■■□□□ 1
COPS7A-216ENST00000543170 SEC63Q9UGP8 760 aaKnown RBP21.31■■□□□ 1
COPS7A-216ENST00000543170 CNTNAP5Q8WYK1 1306 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 MCM3APO60318 1980 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 CCDC196A0A1B0GTZ2 297 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 POTEFA5A3E0 1075 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 CAPN15O75808 1086 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 MYCP01106 439 aaPredicted RBP21.3■■□□□ 1
COPS7A-216ENST00000543170 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 PDRG1Q9NUG6 133 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 PCDHA1Q9Y5I3 950 aa21.3■■□□□ 1
COPS7A-216ENST00000543170 PTPDC1A2A3K4 754 aa21.29■■□□□ 1
COPS7A-216ENST00000543170 RGS19P49795 217 aa21.29■■□□□ 1
COPS7A-216ENST00000543170 RPS6P62753 249 aaKnown RBP21.29■■□□□ 1
COPS7A-216ENST00000543170 CNTN2Q02246 1040 aa21.29■■□□□ 1
COPS7A-216ENST00000543170 BAATQ14032 418 aaPredicted RBP21.29■■□□□ 1
COPS7A-216ENST00000543170 SLC30A10Q6XR72 485 aa21.29■■□□□ 1
COPS7A-216ENST00000543170 FAM217BQ9NTX9 383 aaPredicted RBP21.29■■□□□ 1
COPS7A-216ENST00000543170 MAP3K20Q9NYL2 800 aaKnown RBP21.29■■□□□ 1
COPS7A-216ENST00000543170 SOWAHBA6NEL2 793 aa21.28■■□□□ 1
COPS7A-216ENST00000543170 ASB14A6NK59 587 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms