RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 NMT2O60551 498 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 SMC2O95347 1197 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 TPM2P07951 284 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 GSDMDP57764 484 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 NPY5RQ15761 445 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 GRIK5Q16478 980 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 DPCR1Q3MIW9 517 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 TTC38Q5R3I4 469 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 PODNQ7Z5L7 613 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 SNED1Q8TER0 1413 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 CLIC6Q96NY7 704 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
LMO3-224ENST00000540848 MAD2L2Q9UI95 211 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 PCDHA4Q9UN74 947 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 DAGLAQ9Y4D2 1042 aa11.56□□□□□ -0.56
LMO3-224ENST00000540848 TTC24A2A3L6 582 aaPredicted RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 LAD1O00515 517 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 CBFA2T2O43439 604 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 PLCD1P51178 756 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 GTF2IP78347 998 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 NOLC1Q14978 699 aaKnown RBP eCLIP11.55□□□□□ -0.56
LMO3-224ENST00000540848 POSTNQ15063 836 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 BLIDQ8IZY5 108 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 MLKLQ8NB16 471 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 DYNLL2Q96FJ2 89 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 BEGAINQ9BUH8 593 aa11.55□□□□□ -0.56
LMO3-224ENST00000540848 TTC12Q9H892 705 aaPredicted RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
LMO3-224ENST00000540848 J3QL48 77 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 MMP10P09238 476 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
LMO3-224ENST00000540848 MYL5Q02045 173 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 LONRF3Q496Y0 759 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 METTL16Q86W50 562 aaKnown RBP11.54□□□□□ -0.56
LMO3-224ENST00000540848 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
LMO3-224ENST00000540848 KIAA1524Q8TCG1 905 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SHISA4Q96DD7 197 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
LMO3-224ENST00000540848 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 BARHL2Q9NY43 387 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 POLR2DO15514 142 aaKnown RBP11.54□□□□□ -0.56
LMO3-224ENST00000540848 NRDCO43847 1150 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SLFN14P0C7P3 912 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 RXRBP28702 533 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 GABPAQ06546 454 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 CCDC186Q7Z3E2 898 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SPATA20Q8TB22 786 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 TEKT1Q969V4 418 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 CSRNP2Q9H175 543 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 SAP30BPQ9UHR5 308 aaKnown RBP11.54□□□□□ -0.56
LMO3-224ENST00000540848 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
LMO3-224ENST00000540848 MYH8P13535 1937 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 USP17L3A6NCW0 530 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 USP17L4A6NCW7 530 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 H0YIN7 160 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 HLA-DOAP06340 250 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 GNA11P29992 359 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
LMO3-224ENST00000540848 TXLNAP40222 546 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
LMO3-224ENST00000540848 PNOCQ13519 176 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 ASPRV1Q53RT3 343 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 USP17L1Q7RTZ2 530 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 CNKSR1Q969H4 720 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
LMO3-224ENST00000540848 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
LMO3-224ENST00000540848 EHD4Q9H223 541 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 KCNF1Q9H3M0 494 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 SEC63Q9UGP8 760 aaKnown RBP11.53□□□□□ -0.56
LMO3-224ENST00000540848 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
LMO3-224ENST00000540848 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
LMO3-224ENST00000540848 CCDC194A0A1B0GVG4 234 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 KLRF2D3W0D1 207 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 PTGS1P23219 599 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 ERCC5P28715 1186 aaPredicted RBP11.52□□□□□ -0.57
LMO3-224ENST00000540848 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
LMO3-224ENST00000540848 NCAPHQ15003 741 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 STRIP1Q5VSL9 837 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 KRT25Q7Z3Z0 450 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 SLC44A5Q8NCS7 719 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 SUPT20HQ8NEM7 779 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 CCDC17Q96LX7 622 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 GSDMAQ96QA5 445 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 ZMYND12Q9H0C1 365 aa11.52□□□□□ -0.57
LMO3-224ENST00000540848 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
LMO3-224ENST00000540848 hCG_1642624A0A1W2PR95 340 aa11.51□□□□□ -0.57
LMO3-224ENST00000540848 M0R2N6 131 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 1506.6 ms