RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 Q9Y3F1 56 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ELP1O95163 1332 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 KDM4AO75164 1064 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-208ENST00000540683 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
CDCA3-208ENST00000540683 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-208ENST00000540683 SNX17Q15036 470 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 LRIT3Q3SXY7 679 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 CASC1Q6TDU7 716 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
CDCA3-208ENST00000540683 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 DNERQ8NFT8 737 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 TOX2Q96NM4 488 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 AP5M1Q9H0R1 490 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 VTA1Q9NP79 307 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
CDCA3-208ENST00000540683 TLR3O15455 904 aaKnown RBP12.14□□□□□ -0.47
CDCA3-208ENST00000540683 C6orf222P0C671 652 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-208ENST00000540683 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-208ENST00000540683 TNFAIP2Q03169 654 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
CDCA3-208ENST00000540683 NSMFQ6X4W1 530 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 STARD7Q9NQZ5 370 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 CYP39A1Q9NYL5 469 aa12.14□□□□□ -0.47
CDCA3-208ENST00000540683 ZNF536O15090 1300 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 ABCB11O95342 1321 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 DNAH12Q6ZR08 3092 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 A0A1W2PQ45 241 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-208ENST00000540683 A0A1W2PQY0 241 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 PTPDC1A2A3K4 754 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 NKRFO15226 690 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDCA3-208ENST00000540683 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
CDCA3-208ENST00000540683 PGK1P00558 417 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 SYN1P17600 705 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 ACLYP53396 1101 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 GJA9P57773 515 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 GNASQ5JWF2 1037 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 RNF207Q6ZRF8 634 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 UPF3AQ9H1J1 476 aaKnown RBP12.13□□□□□ -0.47
CDCA3-208ENST00000540683 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
CDCA3-208ENST00000540683 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 SMCHD1A6NHR9 2005 aa12.13□□□□□ -0.47
CDCA3-208ENST00000540683 TNKSO95271 1327 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 NEDD4P46934 1319 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 A0A0U1RQG5 324 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-208ENST00000540683 B4E1Z4 1266 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 KPNA6O60684 536 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 ADAMTS4O75173 837 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 CLTBP09497 229 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 SLC16A2P36021 539 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 NKX3-2P78367 333 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 PDE4DQ08499 809 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-208ENST00000540683 ANKRD33Q7Z3H0 272 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 TMTC2Q8N394 836 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 KLHDC9Q8NEP7 349 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
CDCA3-208ENST00000540683 PRDM5Q9NQX1 630 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-208ENST00000540683 MRPL11Q9Y3B7 192 aaKnown RBP12.12□□□□□ -0.47
CDCA3-208ENST00000540683 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-208ENST00000540683 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
CDCA3-208ENST00000540683 ABCB7O75027 752 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 RAG1P15918 1043 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 TAL1P17542 331 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-208ENST00000540683 CHMLP26374 656 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 CPT1AP50416 773 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 CNTN2Q02246 1040 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 KCNA10Q16322 511 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 RNF20Q5VTR2 975 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 ENAHQ8N8S7 591 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-208ENST00000540683 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 IWS1Q96ST2 819 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
CDCA3-208ENST00000540683 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
CDCA3-208ENST00000540683 ASGR1P07306 291 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 ALDH5A1P51649 535 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-208ENST00000540683 MDM2Q00987 491 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-208ENST00000540683 TLE2Q04725 743 aa12.1□□□□□ -0.47
CDCA3-208ENST00000540683 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
CDCA3-208ENST00000540683 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms