RNA–Protein interactions for RNA: ENST00000540091.1

SPPL3-205, Transcript of signal peptide peptidase like 3, humanhuman

TSL 4

Gene SPPL3, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-205ENST00000540091 USP16Q9Y5T5 823 aa6.56□□□□□ -1.36
SPPL3-205ENST00000540091 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 CEP350Q5VT06 3117 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 FBXO24O75426 580 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 ECEL1O95672 775 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 CTSBP07858 339 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 SRGNP10124 158 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 EIF4A1P60842 406 aaKnown RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 ID3Q02535 119 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 LLGL2Q6P1M3 1020 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 DYMQ7RTS9 669 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 C2CD4AQ8NCU7 369 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 GIMAP7Q8NHV1 300 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 NOC4LQ9BVI4 516 aaKnown RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 ZC3H12CQ9C0D7 883 aaKnown RBP6.55□□□□□ -1.36
SPPL3-205ENST00000540091 NYXQ9GZU5 481 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 ATXN3LQ9H3M9 355 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 WDR90Q96KV7 1748 aa6.55□□□□□ -1.36
SPPL3-205ENST00000540091 RNF123Q5XPI4 1314 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 CCDC88AQ3V6T2 1871 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 GLTPD2A6NH11 291 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 DRD2P14416 443 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 NPR1P16066 1061 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 LIG1P18858 919 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 FSTP19883 344 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 BMP6P22004 513 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 ASPAP45381 313 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 RPS26P62854 115 aaKnown RBP6.54□□□□□ -1.36
SPPL3-205ENST00000540091 ZNF252P-AS1Q0IIN9 211 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 DCTN1Q14203 1278 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 MAP7Q14244 749 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 PCNX4Q63HM2 1172 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 PAOXQ6QHF9 649 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 KIF6Q6ZMV9 814 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 SMC1BQ8NDV3 1235 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 ZNF622Q969S3 477 aaKnown RBP eCLIP6.54□□□□□ -1.36
SPPL3-205ENST00000540091 TAOK3Q9H2K8 898 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 PIDD1Q9HB75 910 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 NMRK2Q9NPI5 230 aa6.54□□□□□ -1.36
SPPL3-205ENST00000540091 NIP7Q9Y221 180 aaKnown RBP eCLIP6.54□□□□□ -1.36
SPPL3-205ENST00000540091 MAP3K15Q6ZN16 1313 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 NUP98P52948 1817 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 FAM95CA0A1B0GW59 222 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 PRAMEF22A3QJZ6 481 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 CELA3AP09093 270 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 VEGFAP15692 232 aaPredicted RBP6.53□□□□□ -1.36
SPPL3-205ENST00000540091 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 CCDC93Q567U6 631 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 RNF43Q68DV7 783 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 RTKN2Q8IZC4 609 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 GSX1Q9H4S2 264 aaPredicted RBP6.53□□□□□ -1.36
SPPL3-205ENST00000540091 C7orf69Q9H7B7 122 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 ACTL7BQ9Y614 415 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 SLX4Q8IY92 1834 aa6.53□□□□□ -1.36
SPPL3-205ENST00000540091 CACNA1SQ13698 1873 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 ZNF862O60290 1169 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 PAGE1O75459 146 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 IGLV1-40P01703 118 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 HOXB7P09629 217 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 TMPOP42166 694 aaKnown RBP6.52□□□□□ -1.37
SPPL3-205ENST00000540091 RIPK4P57078 832 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 NFIAQ12857 509 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 PWP1Q13610 501 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 CRY2Q49AN0 593 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 PARP10Q53GL7 1025 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 SGO2Q562F6 1265 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 TTBK2Q6IQ55 1244 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 STK35Q8TDR2 534 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 EZH1Q92800 747 aaPredicted RBP6.52□□□□□ -1.37
SPPL3-205ENST00000540091 DBNDD2Q9BQY9 259 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 RNF19AQ9NV58 838 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 CRIM1Q9NZV1 1036 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 TSPYL4Q9UJ04 414 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 SCN4AP35499 1836 aa6.52□□□□□ -1.37
SPPL3-205ENST00000540091 IQCA1LA6NCM1 817 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
SPPL3-205ENST00000540091 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
SPPL3-205ENST00000540091 ERVK-24P63145 666 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 TAGLNQ01995 201 aaKnown RBP6.51□□□□□ -1.37
SPPL3-205ENST00000540091 WDR43Q15061 677 aaKnown RBP eCLIP6.51□□□□□ -1.37
SPPL3-205ENST00000540091 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 HSP90AB3PQ58FF7 597 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 MEI1Q5TIA1 1274 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 PPP1R42Q7Z4L9 355 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 GPBAR1Q8TDU6 330 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 RUNDC1Q96C34 613 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 CHMP4AQ9BY43 222 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 CACNA2D2Q9NY47 1150 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 MIS18AQ9NYP9 233 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 PPP1R9AQ9ULJ8 1098 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 ANKRD36CQ5JPF3 1778 aa6.51□□□□□ -1.37
SPPL3-205ENST00000540091 RBM47A0AV96 593 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms