RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 MYCNP04198 464 aaPredicted RBP18.29■□□□□ 0.52
CIT-210ENST00000539413 RARBP10826 455 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 ACVR2BQ13705 512 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 BAATQ14032 418 aaPredicted RBP18.29■□□□□ 0.52
CIT-210ENST00000539413 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
CIT-210ENST00000539413 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
CIT-210ENST00000539413 USH1GQ495M9 461 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 TMEM67Q5HYA8 995 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 IGDCC4Q8TDY8 1250 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
CIT-210ENST00000539413 JMJD4Q9H9V9 463 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 VAT1LQ9HCJ6 419 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 XPNPEP3Q9NQH7 507 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 MAD2L2Q9UI95 211 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 NR2E3Q9Y5X4 410 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
CIT-210ENST00000539413 PDE4DIPQ5VU43 2346 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 LRRC41Q15345 812 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 C7orf61Q8IZ16 206 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 KATNBL1Q9H079 304 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 ABHD16BQ9H3Z7 469 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 GPHNQ9NQX3 736 aaPredicted RBP18.28■□□□□ 0.52
CIT-210ENST00000539413 FAM184BQ9ULE4 1060 aa18.28■□□□□ 0.52
CIT-210ENST00000539413 PTPDC1A2A3K4 754 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.52
CIT-210ENST00000539413 KBTBD13C9JR72 458 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 KLRF2D3W0D1 207 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 ADCY6O43306 1168 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 PRC1O43663 620 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 PGK1P00558 417 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
CIT-210ENST00000539413 GRM4Q14833 912 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 LRRC26Q2I0M4 334 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 QRICH1Q2TAL8 776 aa18.27■□□□□ 0.52
CIT-210ENST00000539413 LCTP09848 1927 aa18.27■□□□□ 0.51
CIT-210ENST00000539413 ASB14A6NK59 587 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 CALML3P27482 149 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 TROAPQ12815 778 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 CCDC144BQ3MJ40 725 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 RNF207Q6ZRF8 634 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 SMCHD1A6NHR9 2005 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 LRRC37A2A6NM11 1700 aa18.26■□□□□ 0.51
CIT-210ENST00000539413 SYNRGQ9UMZ2 1314 aa18.25■□□□□ 0.51
CIT-210ENST00000539413 ADAMTS4O75173 837 aa18.25■□□□□ 0.51
CIT-210ENST00000539413 MCM5P33992 734 aa18.25■□□□□ 0.51
CIT-210ENST00000539413 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
CIT-210ENST00000539413 ATN1P54259 1190 aaPredicted RBP18.25■□□□□ 0.51
CIT-210ENST00000539413 RPS6P62753 249 aaKnown RBP18.25■□□□□ 0.51
CIT-210ENST00000539413 SLC35G1Q2M3R5 365 aa18.25■□□□□ 0.51
CIT-210ENST00000539413 ADD3Q9UEY8 706 aaKnown RBP18.25■□□□□ 0.51
CIT-210ENST00000539413 ABCB11O95342 1321 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 SH2B2O14492 632 aaPredicted RBP18.24■□□□□ 0.51
CIT-210ENST00000539413 ADCYAP1R1P41586 468 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 RNF180Q86T96 592 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 FBXO11Q86XK2 927 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 TBC1D5Q92609 795 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 FERMT2Q96AC1 680 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 MTMR8Q96EF0 704 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 TMEM87BQ96K49 555 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 MTA3Q9BTC8 594 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 MYL10Q9BUA6 226 aa18.24■□□□□ 0.51
CIT-210ENST00000539413 ZMYND8Q9ULU4 1186 aaPredicted RBP18.24■□□□□ 0.51
CIT-210ENST00000539413 COLQQ9Y215 455 aaPredicted RBP18.24■□□□□ 0.51
CIT-210ENST00000539413 MCM3APO60318 1980 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.23■□□□□ 0.51
CIT-210ENST00000539413 PPP1R11O60927 126 aaPredicted RBP18.23■□□□□ 0.51
CIT-210ENST00000539413 DUSP11O75319 330 aaKnown RBP18.23■□□□□ 0.51
CIT-210ENST00000539413 IRX5P78411 483 aaPredicted RBP18.23■□□□□ 0.51
CIT-210ENST00000539413 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 CHRDL2Q6WN34 429 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
CIT-210ENST00000539413 RASEFQ8IZ41 740 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 ZNF654Q8IZM8 581 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 MORC4Q8TE76 937 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 NUP133Q8WUM0 1156 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 PDGFCQ9NRA1 345 aa18.23■□□□□ 0.51
CIT-210ENST00000539413 MYADML2A6NDP7 307 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 ZBTB5O15062 677 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 CYTH3O43739 400 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 SYN1P17600 705 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 TAPT1Q6NXT6 567 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 SLC39A5Q6ZMH5 540 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 NFXL1Q6ZNB6 911 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 RGS22Q8NE09 1264 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 PIGSQ96S52 555 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 AMNQ9BXJ7 453 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 PCDH10Q9P2E7 1040 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 PHF24Q9UPV7 400 aa18.22■□□□□ 0.51
CIT-210ENST00000539413 DDAH1O94760 285 aa18.21■□□□□ 0.51
CIT-210ENST00000539413 TNFAIP2Q03169 654 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms