RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 GTPBP6O43824 516 aaPredicted RBP16.75■□□□□ 0.27
ATL3-203ENST00000538786 BMP3P12645 472 aa16.75■□□□□ 0.27
ATL3-203ENST00000538786 RRAGBQ5VZM2 374 aa16.75■□□□□ 0.27
ATL3-203ENST00000538786 MTRQ99707 1265 aa16.75■□□□□ 0.27
ATL3-203ENST00000538786 ARHGEF10LQ9HCE6 1279 aa16.75■□□□□ 0.27
ATL3-203ENST00000538786 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
ATL3-203ENST00000538786 PCDHA1Q9Y5I3 950 aa16.75■□□□□ 0.27
ATL3-203ENST00000538786 A0A1W2PRG0 241 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 WNT10BO00744 389 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 CASP1P29466 404 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 TNNI2P48788 182 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 FANCCQ00597 558 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 UBE2SQ16763 222 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 PPP4R3AQ6IN85 833 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 BTNL9Q6UXG8 535 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 RASSF8Q8NHQ8 419 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 MTMR9Q96QG7 549 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 NUP88Q99567 741 aaPredicted RBP16.74■□□□□ 0.27
ATL3-203ENST00000538786 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
ATL3-203ENST00000538786 TMEM39BQ9GZU3 492 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 FANCLQ9NW38 375 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 EDIL3O43854 480 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 RPS12P25398 132 aaKnown RBP16.74■□□□□ 0.27
ATL3-203ENST00000538786 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.27
ATL3-203ENST00000538786 SYDE2Q5VT97 1194 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 CUEDC2Q9H467 287 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 ZBTB21Q9ULJ3 1066 aa16.74■□□□□ 0.27
ATL3-203ENST00000538786 TMEM232C9JQI7 657 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 OFD1O75665 1012 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 MYL1P05976 194 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 ZNF280AP59817 542 aaPredicted RBP16.73■□□□□ 0.27
ATL3-203ENST00000538786 R3HDM1Q15032 1099 aaKnown RBP16.73■□□□□ 0.27
ATL3-203ENST00000538786 CALCRLQ16602 461 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 NAALADL2Q58DX5 795 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 CABP7Q86V35 215 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 IGSF22Q8N9C0 903 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 KIAA1524Q8TCG1 905 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 STAMQ92783 540 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 AMNQ9BXJ7 453 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 IMPACTQ9P2X3 320 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 PGAP2Q9UHJ9 254 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 TMX2Q9Y320 296 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
ATL3-203ENST00000538786 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATL3-203ENST00000538786 MAP3K10Q02779 954 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 IKQ13123 557 aaPredicted RBP16.72■□□□□ 0.27
ATL3-203ENST00000538786 CUL4BQ13620 913 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 NAP1L4Q99733 375 aaKnown RBP16.72■□□□□ 0.27
ATL3-203ENST00000538786 BLZF1Q9H2G9 400 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 MAGEF1Q9HAY2 307 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 GOPCQ9HD26 462 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 BRCA1P38398 1863 aaKnown RBP16.72■□□□□ 0.27
ATL3-203ENST00000538786 SLC37A4O43826 429 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 TDP2O95551 362 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
ATL3-203ENST00000538786 TECP42680 631 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 ECE1P42892 770 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 MCTP2Q6DN12 878 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
ATL3-203ENST00000538786 FBXO11Q86XK2 927 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 CDAN1Q8IWY9 1227 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 MED15Q96RN5 788 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 PYCARDQ9ULZ3 195 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
ATL3-203ENST00000538786 SERPINC1P01008 464 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 RPN1P04843 607 aaKnown RBP16.71■□□□□ 0.27
ATL3-203ENST00000538786 ZNF18P17022 549 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 TXKP42681 527 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATL3-203ENST00000538786 FILIP1Q7Z7B0 1213 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 ACER1Q8TDN7 264 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
ATL3-203ENST00000538786 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 KBTBD4Q9NVX7 518 aa16.71■□□□□ 0.27
ATL3-203ENST00000538786 ARFGEF1Q9Y6D6 1849 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
ATL3-203ENST00000538786 CAP2P40123 477 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 UBASH3AP57075 661 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 GSDMDP57764 484 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 LRMPQ12912 555 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 AP3B2Q13367 1082 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 LRRC8AQ8IWT6 810 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
ATL3-203ENST00000538786 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 RAB34Q9BZG1 259 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms