RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP30-208ENST00000536393 HYOU1Q9Y4L1 999 aa7.44□□□□□ -1.22
USP30-208ENST00000536393 BZW2Q9Y6E2 419 aaKnown RBP7.44□□□□□ -1.22
USP30-208ENST00000536393 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
USP30-208ENST00000536393 CNTNAP5Q8WYK1 1306 aa7.44□□□□□ -1.22
USP30-208ENST00000536393 TOGARAM1Q9Y4F4 1720 aa7.44□□□□□ -1.22
USP30-208ENST00000536393 COL14A1Q05707 1796 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 MYH13Q9UKX3 1938 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 GOLGA6BA6NDN3 693 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 ERICH4A6NGS2 130 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 RBAK-RBAKDNI3L0D1 243 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 POLR3GO15318 223 aaPredicted RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 RNF40O75150 1001 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 PARP1P09874 1014 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 CYP19A1P11511 503 aaPredicted RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 TRIM21P19474 475 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 GBP1P32455 592 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 UBA7P41226 1012 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 STAT6P42226 847 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 PHKA1P46020 1223 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 FXR1P51114 621 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP30-208ENST00000536393 VSNL1P62760 191 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 UBXN1Q04323 297 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 PTGDRQ13258 359 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 SF3B3Q15393 1217 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 TTC31Q49AM3 519 aaPredicted RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 CCDC122Q5T0U0 273 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 RRAGBQ5VZM2 374 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 PPP1R18Q6NYC8 613 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 LRIG3Q6UXM1 1119 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 CCNI2Q6ZMN8 369 aaPredicted RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 KIAA1328Q86T90 577 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 TADA2BQ86TJ2 420 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 EFCAB3Q8N7B9 438 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 CCDC102AQ96A19 550 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 JAKMIP2Q96AA8 810 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 VTI1AQ96AJ9 217 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 CCDC42Q96M95 316 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 MXD3Q9BW11 206 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 SPZ1Q9BXG8 430 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 CRNKL1Q9BZJ0 848 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 ANKRD2Q9GZV1 360 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 GEMIN8Q9NWZ8 242 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 LRP2BPQ9P2M1 347 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 FBXL5Q9UKA1 691 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 HPCAL4Q9UM19 191 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 SNX12Q9UMY4 172 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 PCDHA4Q9UN74 947 aa7.43□□□□□ -1.22
USP30-208ENST00000536393 DIS3Q9Y2L1 958 aaKnown RBP7.43□□□□□ -1.22
USP30-208ENST00000536393 NHSL1Q5SYE7 1610 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 GOLGA6CA6NDK9 693 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 HMGB1P1B2RPK0 211 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 SNPHO15079 494 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 TEX33O43247 280 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 HSF2BPO75031 334 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 GOLGA6DP0CG33 693 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 FOSBP53539 338 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 NLRP5P59047 1200 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 ERVK-24P63145 666 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 GSTO1P78417 241 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 PAK2Q13177 524 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 BIRC3Q13489 604 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 MTMR3Q13615 1198 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 PDIA5Q14554 519 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 MAN2A1Q16706 1144 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 CFAP221Q4G0U5 840 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 ICE2Q659A1 982 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 TTI2Q6NXR4 508 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 PAXIP1Q6ZW49 1069 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 IFT20Q8IY31 132 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 BLIDQ8IZY5 108 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 GUF1Q8N442 669 aaKnown RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 ENAHQ8N8S7 591 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 AENQ8WTP8 325 aaKnown RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 BBXQ8WY36 941 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 FAM89AQ96GI7 184 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 CEP63Q96MT8 703 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 MED15Q96RN5 788 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 RIOK1Q9BRS2 568 aaKnown RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 FAM204AQ9H8W3 233 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 GPHNQ9NQX3 736 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 GOLGA6AQ9NYA3 693 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 INTUQ9ULD6 942 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 ITGB4P16144 1822 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 XDHP47989 1333 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 MYO3BQ8WXR4 1341 aa7.42□□□□□ -1.22
USP30-208ENST00000536393 COL1A1P02452 1464 aaPredicted RBP7.42□□□□□ -1.22
USP30-208ENST00000536393 SCN7AQ01118 1682 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 CACNA1SQ13698 1873 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 CCDC194A0A1B0GVG4 234 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 TTC26A0AVF1 554 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 H3BQF6 201 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 CCDC188H7C350 402 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 M0R2N6 131 aa7.41□□□□□ -1.22
USP30-208ENST00000536393 NPHP1O15259 732 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms