RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 FBXL16Q8N461 479 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 TCEANC2Q96MN5 208 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 GPHNQ9NQX3 736 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-205ENST00000536255 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
RPAIN-205ENST00000536255 ALAS1P13196 640 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 GNAQP50148 359 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 COL9A3Q14050 684 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-205ENST00000536255 Q6ZUG5 572 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 TRPV1Q8NER1 839 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 IL17RAQ96F46 866 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 TRERF1Q96PN7 1200 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 MAD2L2Q9UI95 211 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 OGDHLQ9ULD0 1010 aa15.74■□□□□ 0.11
RPAIN-205ENST00000536255 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
RPAIN-205ENST00000536255 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 DHX16O60231 1041 aaKnown RBP15.73■□□□□ 0.11
RPAIN-205ENST00000536255 CPA1P15085 419 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 CNGA1P29973 690 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 RCAN1P53805 252 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 LHX8Q68G74 356 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 ANKLE1Q8NAG6 615 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 TINF2Q9BSI4 451 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 UBA5Q9GZZ9 404 aa15.73■□□□□ 0.11
RPAIN-205ENST00000536255 A1CFQ9NQ94 594 aaKnown RBP15.73■□□□□ 0.11
RPAIN-205ENST00000536255 DDX20Q9UHI6 824 aaKnown RBP15.73■□□□□ 0.11
RPAIN-205ENST00000536255 PFASO15067 1338 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 ZBTB43O43298 467 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 MSCO60682 206 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 TAL1P17542 331 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-205ENST00000536255 MUM1L1Q5H9M0 696 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 APOA5Q6Q788 366 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 ZNF467Q7Z7K2 595 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-205ENST00000536255 MICU3Q86XE3 530 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 STAG2Q8N3U4 1231 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 MSL3Q8N5Y2 521 aaKnown RBP15.72■□□□□ 0.11
RPAIN-205ENST00000536255 BRF1Q92994 677 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 MYL10Q9BUA6 226 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 C22orf23Q9BZE7 217 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
RPAIN-205ENST00000536255 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 PDRG1Q9NUG6 133 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
RPAIN-205ENST00000536255 NRBP1Q9UHY1 535 aa15.72■□□□□ 0.11
RPAIN-205ENST00000536255 SYNGAP1Q96PV0 1343 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 ZNFX1Q9P2E3 1918 aaKnown RBP15.71■□□□□ 0.11
RPAIN-205ENST00000536255 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 SEPT4O43236 478 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 SMARCA1P28370 1054 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 PPP2R5BQ15173 497 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 MAMDC4Q6UXC1 1216 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 ADGRF4Q8IZF3 695 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 NAP1L2Q9ULW6 460 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-205ENST00000536255 PLXNA1Q9UIW2 1896 aa15.71■□□□□ 0.11
RPAIN-205ENST00000536255 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
RPAIN-205ENST00000536255 MNX1P50219 401 aaPredicted RBP15.7■□□□□ 0.1
RPAIN-205ENST00000536255 CNTN2Q02246 1040 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 TRAF1Q13077 416 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 CDC37Q16543 378 aaPredicted RBP15.7■□□□□ 0.1
RPAIN-205ENST00000536255 PRAMEF19Q5SWL8 479 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 FAM133AQ8N9E0 248 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 DIS3LQ8TF46 1054 aaKnown RBP15.7■□□□□ 0.1
RPAIN-205ENST00000536255 PAWRQ96IZ0 340 aaKnown RBP15.7■□□□□ 0.1
RPAIN-205ENST00000536255 FGD4Q96M96 766 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 CNPY2Q9Y2B0 182 aa15.7■□□□□ 0.1
RPAIN-205ENST00000536255 GOLGA8AA7E2F4 631 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 GOLGA8BA8MQT2 603 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 NFIBO00712 420 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 RXRAP19793 462 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
RPAIN-205ENST00000536255 APOBRQ0VD83 1088 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 RTN1Q16799 776 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 NECAB2Q7Z6G3 386 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 CCDC144CPQ8IYA2 1237 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 HTATIP2Q9BUP3 242 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 SPZ1Q9BXG8 430 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-205ENST00000536255 RIOX1Q9H6W3 641 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 JMJD4Q9H9V9 463 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 BRPF3Q9ULD4 1205 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 PDE4DIPQ5VU43 2346 aa15.69■□□□□ 0.1
RPAIN-205ENST00000536255 ZBTB5O15062 677 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 SNAI1O95863 264 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-205ENST00000536255 EVCP57679 992 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 USH1GQ495M9 461 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 RAB11FIP4Q86YS3 637 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 IL27Q8NEV9 243 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 CLEC4DQ8WXI8 215 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 BACH2Q9BYV9 841 aa15.68■□□□□ 0.1
RPAIN-205ENST00000536255 SEC63Q9UGP8 760 aaKnown RBP15.68■□□□□ 0.1
RPAIN-205ENST00000536255 FRMPD3Q5JV73 1810 aa15.67■□□□□ 0.1
RPAIN-205ENST00000536255 SOWAHBA6NEL2 793 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms