RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 GJA9P57773 515 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 TIMM10P62072 90 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 TCF15Q12870 199 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 TMEM132BQ14DG7 1078 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 ABCB5Q2M3G0 1257 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 PUS10Q3MIT2 529 aaKnown RBP7.92□□□□□ -1.14
CD44-237ENST00000534082 GNASQ5JWF2 1037 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 HERC6Q8IVU3 1022 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 SLC43A3Q8NBI5 491 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 TATDN2Q93075 761 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 XAGE2Q96GT9 111 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 PRRX2Q99811 253 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 TRPV6Q9H1D0 765 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 DNAH14Q0VDD8 3507 aa7.92□□□□□ -1.14
CD44-237ENST00000534082 A0A1B0GUL7 405 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 KIF28PB7ZC32 967 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 H3BQ06 376 aaPredicted RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 B4GALT4O60513 344 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 SNAI1O95863 264 aaPredicted RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 ACTN1P12814 892 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 GUCY1A2P33402 732 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 PPP4CP60510 307 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 CERKLQ49MI3 558 aaPredicted RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 NAA16Q6N069 864 aaPredicted RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 PADI6Q6TGC4 694 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 CXCL17Q6UXB2 119 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 NUDT18Q6ZVK8 323 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 DEFB128Q7Z7B8 93 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 ADGRA1Q86SQ6 560 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 MSL3Q8N5Y2 521 aaKnown RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 PHOSPHO2Q8TCD6 241 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 USP44Q9H0E7 712 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 CABP5Q9NP86 173 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 LRP2BPQ9P2M1 347 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 SERPINB13Q9UIV8 391 aa7.91□□□□□ -1.14
CD44-237ENST00000534082 TSR3Q9UJK0 312 aaKnown RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 PA2G4Q9UQ80 394 aaKnown RBP7.91□□□□□ -1.14
CD44-237ENST00000534082 CACNA1GO43497 2377 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 PTPRZ1P23471 2315 aaPredicted RBP7.9□□□□□ -1.14
CD44-237ENST00000534082 TECTAO75443 2155 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 A0A1W2PRG0 241 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 LCHNA4D1U4 455 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 CTAGE5O15320 804 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 IRS1P35568 1242 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 BEX3Q00994 111 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 ITGA7Q13683 1181 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 ACVR2BQ13705 512 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 SEPT2Q15019 361 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 CCDC144BQ3MJ40 725 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 KIAA1755Q5JYT7 1200 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 RIOX2Q8IUF8 465 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 NEK9Q8TD19 979 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 UPF3BQ9BZI7 483 aaKnown RBP7.9□□□□□ -1.14
CD44-237ENST00000534082 EHD4Q9H223 541 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 PRKAG3Q9UGI9 489 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 MUTYHQ9UIF7 546 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 MTUS1Q9ULD2 1270 aa7.9□□□□□ -1.14
CD44-237ENST00000534082 GRIN2DO15399 1336 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 CABYRO75952 493 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 KRT37O76014 449 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 ARID4AP29374 1257 aaPredicted RBP7.89□□□□□ -1.15
CD44-237ENST00000534082 SHMT1P34896 483 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 HERC4Q5GLZ8 1057 aaPredicted RBP7.89□□□□□ -1.15
CD44-237ENST00000534082 MAMDC4Q6UXC1 1216 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 BMP8AQ7Z5Y6 402 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 ADHFE1Q8IWW8 467 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 SUGP1Q8IWZ8 645 aaKnown RBP7.89□□□□□ -1.15
CD44-237ENST00000534082 SPICE1Q8N0Z3 855 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 FAM50BQ9Y247 325 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 ZNFX1Q9P2E3 1918 aaKnown RBP7.89□□□□□ -1.15
CD44-237ENST00000534082 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
CD44-237ENST00000534082 PARP14Q460N5 1801 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 MPHOSPH10O00566 681 aaKnown RBP7.88□□□□□ -1.15
CD44-237ENST00000534082 CYP2C9P11712 490 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 COPB2P35606 906 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 MCAMP43121 646 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 DYNLL1P63167 89 aaKnown RBP7.88□□□□□ -1.15
CD44-237ENST00000534082 NKX3-2P78367 333 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 TFCP2Q12800 502 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 PKN1Q16512 942 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 NYAP1Q6ZVC0 841 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 ATOH1Q92858 354 aaPredicted RBP7.88□□□□□ -1.15
CD44-237ENST00000534082 NEUROD6Q96NK8 337 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 SEZ6LQ9BYH1 1024 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 ABHD16BQ9H3Z7 469 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 NPDC1Q9NQX5 325 aaPredicted RBP7.88□□□□□ -1.15
CD44-237ENST00000534082 ZNF214Q9UL59 606 aaPredicted RBP7.88□□□□□ -1.15
CD44-237ENST00000534082 AKAP2Q9Y2D5 859 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 RIF1Q5UIP0 2472 aaKnown RBP7.88□□□□□ -1.15
CD44-237ENST00000534082 GVINP1Q7Z2Y8 2422 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 MYH1P12882 1939 aa7.88□□□□□ -1.15
CD44-237ENST00000534082 KMT2BQ9UMN6 2715 aaPredicted RBP7.87□□□□□ -1.15
CD44-237ENST00000534082 KMT2EQ8IZD2 1858 aa7.87□□□□□ -1.15
CD44-237ENST00000534082 TANC1Q9C0D5 1861 aa7.87□□□□□ -1.15
CD44-237ENST00000534082 COL11A1P12107 1806 aaPredicted RBP7.87□□□□□ -1.15
CD44-237ENST00000534082 ASTN1O14525 1302 aa7.87□□□□□ -1.15
CD44-237ENST00000534082 COL4A6Q14031 1691 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms