RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 BAATQ14032 418 aaPredicted RBP35.39■■■■□ 3.26
SSSCA1-207ENST00000533115 RNF180Q86T96 592 aa35.39■■■■□ 3.26
SSSCA1-207ENST00000533115 ADGRF4Q8IZF3 695 aa35.39■■■■□ 3.26
SSSCA1-207ENST00000533115 CLEC4DQ8WXI8 215 aa35.39■■■■□ 3.26
SSSCA1-207ENST00000533115 KATNBL1Q9H079 304 aa35.39■■■■□ 3.26
SSSCA1-207ENST00000533115 ZMYND8Q9ULU4 1186 aaPredicted RBP35.39■■■■□ 3.26
SSSCA1-207ENST00000533115 ASTN1O14525 1302 aa35.38■■■■□ 3.25
SSSCA1-207ENST00000533115 ERICH2A1L162 156 aa35.38■■■■□ 3.25
SSSCA1-207ENST00000533115 IFIT3O14879 490 aaKnown RBP35.38■■■■□ 3.25
SSSCA1-207ENST00000533115 ATN1P54259 1190 aaPredicted RBP35.38■■■■□ 3.25
SSSCA1-207ENST00000533115 ADCYAP1R1P41586 468 aa35.37■■■■□ 3.25
SSSCA1-207ENST00000533115 CDC37Q16543 378 aaPredicted RBP35.37■■■■□ 3.25
SSSCA1-207ENST00000533115 CCDC144BQ3MJ40 725 aa35.37■■■■□ 3.25
SSSCA1-207ENST00000533115 DNAH12Q6ZR08 3092 aa35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 PTPDC1A2A3K4 754 aa35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 ADAMTS4O75173 837 aa35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 SART3Q15020 963 aaKnown RBP35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 CHST3Q7LGC8 479 aa35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 PURBQ96QR8 312 aaKnown RBP35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 PHF24Q9UPV7 400 aa35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 LCTP09848 1927 aa35.36■■■■□ 3.25
SSSCA1-207ENST00000533115 SYNRGQ9UMZ2 1314 aa35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 DUSP11O75319 330 aaKnown RBP35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 SYN1P17600 705 aa35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 USH1GQ495M9 461 aa35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 MB21D2Q8IYB1 491 aaPredicted RBP35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 PRO3102Q9H379 93 aa35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 ANO2Q9NQ90 1003 aa35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 RBM27Q9P2N5 1060 aaKnown RBP35.35■■■■□ 3.25
SSSCA1-207ENST00000533115 DHX16O60231 1041 aaKnown RBP35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 WTAPQ15007 396 aa35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 SLC39A5Q6ZMH5 540 aa35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 RNF207Q6ZRF8 634 aa35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 STAG2Q8N3U4 1231 aa35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 FERMT2Q96AC1 680 aa35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 JMJD4Q9H9V9 463 aa35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 ADD3Q9UEY8 706 aaKnown RBP35.34■■■■□ 3.25
SSSCA1-207ENST00000533115 ADCY6O43306 1168 aa35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 ANTXR2P58335 489 aa35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 SLC30A10Q6XR72 485 aa35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 SENP2Q9HC62 589 aa35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 VAT1LQ9HCJ6 419 aa35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 MAD2L2Q9UI95 211 aa35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 DDX49Q9Y6V7 483 aaKnown RBP35.33■■■■□ 3.25
SSSCA1-207ENST00000533115 SLC27A2O14975 620 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 NEFLP07196 543 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 CALML3P27482 149 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 RTP1P59025 263 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 QRICH1Q2TAL8 776 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 TMEM67Q5HYA8 995 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 MORC4Q8TE76 937 aa35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 RANBP2P49792 3224 aaKnown RBP35.32■■■■□ 3.24
SSSCA1-207ENST00000533115 PALM3A6NDB9 673 aaPredicted RBP35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 KLRF2D3W0D1 207 aa35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 NECTIN1Q15223 517 aa35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 RGS22Q8NE09 1264 aa35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 KLHDC9Q8NEP7 349 aa35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 IGDCC4Q8TDY8 1250 aa35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 TSEN34Q9BSV6 310 aaKnown RBP35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 ABCB11O95342 1321 aa35.31■■■■□ 3.24
SSSCA1-207ENST00000533115 LOC102724159A0A0B4J2E5 919 aa35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 ALDH5A1P51649 535 aaPredicted RBP35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 RPS6P62753 249 aaKnown RBP35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 PWP2Q15269 919 aaKnown RBP35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 CREB3L3Q68CJ9 461 aa35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 CASC1Q6TDU7 716 aa35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 TRIOBPQ9H2D6 2365 aa35.3■■■■□ 3.24
SSSCA1-207ENST00000533115 LRRC37A2A6NM11 1700 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 CDC45O75419 566 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 GRM4Q14833 912 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 SNX17Q15036 470 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 FBXO11Q86XK2 927 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 UPF3AQ9H1J1 476 aaKnown RBP35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 SPC25Q9HBM1 224 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 ATP11BQ9Y2G3 1177 aa35.29■■■■□ 3.24
SSSCA1-207ENST00000533115 C11orf97A0A1B0GVM6 126 aaPredicted RBP35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 GJA9P57773 515 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 TNFAIP2Q03169 654 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 C1orf53Q5VUE5 145 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 EEPD1Q7L9B9 569 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 GDF15Q99988 308 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 MAF1Q9H063 256 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 VTA1Q9NP79 307 aa35.28■■■■□ 3.24
SSSCA1-207ENST00000533115 A0A1W2PQ45 241 aaPredicted RBP35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 A0A1W2PQY0 241 aa35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 MYADML2A6NDP7 307 aa35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 C6orf222P0C671 652 aaPredicted RBP35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 CST5P28325 142 aaPredicted RBP35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 TROAPQ12815 778 aa35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 CCSAPQ6IQ19 270 aaPredicted RBP35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 TAPT1Q6NXT6 567 aa35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 FBXO16Q8IX29 292 aaPredicted RBP35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 MTA3Q9BTC8 594 aa35.27■■■■□ 3.24
SSSCA1-207ENST00000533115 MOXD2PA6NHM9 499 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 SLC34A2O95436 690 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 ACLYP53396 1101 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 KCNA10Q16322 511 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 CATIPQ7Z7H3 387 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 DNERQ8NFT8 737 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 MTMR8Q96EF0 704 aa35.26■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms