RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
CPSF1-210ENST00000532935 MAD2L2Q9UI95 211 aa17.93■□□□□ 0.46
CPSF1-210ENST00000532935 PALM3A6NDB9 673 aaPredicted RBP17.92■□□□□ 0.46
CPSF1-210ENST00000532935 SOWAHBA6NEL2 793 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 KLRF2D3W0D1 207 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 NFIBO00712 420 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 DHX16O60231 1041 aaKnown RBP17.92■□□□□ 0.46
CPSF1-210ENST00000532935 TROAPQ12815 778 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 COL9A3Q14050 684 aaPredicted RBP17.92■□□□□ 0.46
CPSF1-210ENST00000532935 GRM4Q14833 912 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 CATIPQ7Z7H3 387 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 C11orf49Q9H6J7 331 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 JMJD4Q9H9V9 463 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 LY9Q9HBG7 655 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
CPSF1-210ENST00000532935 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.92■□□□□ 0.46
CPSF1-210ENST00000532935 AKR1A1P14550 325 aa17.91■□□□□ 0.46
CPSF1-210ENST00000532935 BAATQ14032 418 aaPredicted RBP17.91■□□□□ 0.46
CPSF1-210ENST00000532935 USH1GQ495M9 461 aa17.91■□□□□ 0.46
CPSF1-210ENST00000532935 ARMCX2Q7L311 632 aa17.91■□□□□ 0.46
CPSF1-210ENST00000532935 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
CPSF1-210ENST00000532935 TMEM87BQ96K49 555 aa17.91■□□□□ 0.46
CPSF1-210ENST00000532935 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
CPSF1-210ENST00000532935 ZHX1Q9UKY1 873 aaPredicted RBP17.91■□□□□ 0.46
CPSF1-210ENST00000532935 ASTN1O14525 1302 aa17.91■□□□□ 0.46
CPSF1-210ENST00000532935 PTPDC1A2A3K4 754 aa17.9■□□□□ 0.46
CPSF1-210ENST00000532935 SH2B2O14492 632 aaPredicted RBP17.9■□□□□ 0.46
CPSF1-210ENST00000532935 COL6A1P12109 1028 aa17.9■□□□□ 0.46
CPSF1-210ENST00000532935 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
CPSF1-210ENST00000532935 QRICH1Q2TAL8 776 aa17.9■□□□□ 0.46
CPSF1-210ENST00000532935 ARRDC4Q8NCT1 418 aa17.9■□□□□ 0.46
CPSF1-210ENST00000532935 ABHD16BQ9H3Z7 469 aa17.9■□□□□ 0.46
CPSF1-210ENST00000532935 ASB14A6NK59 587 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 DNM1LO00429 736 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 RARBP10826 455 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 TSGA10IPQ3SY00 556 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 SLC30A10Q6XR72 485 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 RNF207Q6ZRF8 634 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 FBXO11Q86XK2 927 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 ZNF654Q8IZM8 581 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 MTMR8Q96EF0 704 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 NEK1Q96PY6 1258 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 PURBQ96QR8 312 aaKnown RBP17.89■□□□□ 0.45
CPSF1-210ENST00000532935 KATNBL1Q9H079 304 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 ABCB11O95342 1321 aa17.89■□□□□ 0.45
CPSF1-210ENST00000532935 DDAH1O94760 285 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 CALML3P27482 149 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 GJC2Q5T442 439 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-210ENST00000532935 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 NUP133Q8WUM0 1156 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 LENG1Q96BZ8 264 aaPredicted RBP17.88■□□□□ 0.45
CPSF1-210ENST00000532935 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 LRRC2Q9BYS8 371 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 XPNPEP3Q9NQH7 507 aa17.88■□□□□ 0.45
CPSF1-210ENST00000532935 ADD3Q9UEY8 706 aaKnown RBP17.88■□□□□ 0.45
CPSF1-210ENST00000532935 CCDC69A6NI79 296 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 H0YGN5 161 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 ZBTB5O15062 677 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 EVI5O60447 810 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 REC8O95072 547 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 MYCNP04198 464 aaPredicted RBP17.87■□□□□ 0.45
CPSF1-210ENST00000532935 LIFRP42702 1097 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 ALDH5A1P51649 535 aaPredicted RBP17.87■□□□□ 0.45
CPSF1-210ENST00000532935 RPS6P62753 249 aaKnown RBP17.87■□□□□ 0.45
CPSF1-210ENST00000532935 KRT32Q14532 448 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 LRRC41Q15345 812 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 ADCK5Q3MIX3 580 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 CCDC144BQ3MJ40 725 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 RGS22Q8NE09 1264 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 MYL10Q9BUA6 226 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 RIOX1Q9H6W3 641 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 NR2E3Q9Y5X4 410 aa17.87■□□□□ 0.45
CPSF1-210ENST00000532935 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
CPSF1-210ENST00000532935 KBTBD13C9JR72 458 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 CYTH3O43739 400 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 PGK1P00558 417 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 CTCFLQ8NI51 663 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-210ENST00000532935 MORC4Q8TE76 937 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 KCNB2Q92953 911 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 AMNQ9BXJ7 453 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 SENP6Q9GZR1 1112 aaPredicted RBP17.86■□□□□ 0.45
CPSF1-210ENST00000532935 MAF1Q9H063 256 aa17.86■□□□□ 0.45
CPSF1-210ENST00000532935 MRPL11Q9Y3B7 192 aaKnown RBP17.86■□□□□ 0.45
CPSF1-210ENST00000532935 LOC102724159A0A0B4J2E5 919 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 ADCY6O43306 1168 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 PPP1R11O60927 126 aaPredicted RBP17.85■□□□□ 0.45
CPSF1-210ENST00000532935 DUSP11O75319 330 aaKnown RBP17.85■□□□□ 0.45
CPSF1-210ENST00000532935 KIF5BP33176 963 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 HSPA4P34932 840 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
CPSF1-210ENST00000532935 PWP2Q15269 919 aaKnown RBP17.85■□□□□ 0.45
CPSF1-210ENST00000532935 KIAA1217Q5T5P2 1943 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 DHX32Q7L7V1 743 aaKnown RBP17.85■□□□□ 0.45
CPSF1-210ENST00000532935 SGMS1Q86VZ5 419 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 HOMER1Q86YM7 354 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms