RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 AIFM3Q96NN9 605 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 PIGSQ96S52 555 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 MOV10L1Q9BXT6 1211 aaKnown RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 RANBP17Q9H2T7 1088 aaKnown RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 RIOX1Q9H6W3 641 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 EFCC1Q9HA90 598 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 ZCCHC17Q9NP64 241 aaKnown RBP9.31□□□□□ -0.92
TRIM49-202ENST00000532501 MORF4L1Q9UBU8 362 aa9.31□□□□□ -0.92
TRIM49-202ENST00000532501 MYPNQ86TC9 1320 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 TK2O00142 265 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 GPR25O00155 361 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 OPLAHO14841 1288 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 PLA2G6O60733 806 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 OSBPP22059 807 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 ERVK-24P63145 666 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 PKN1Q16512 942 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 CDC37Q16543 378 aaPredicted RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 MUM1L1Q5H9M0 696 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 GPATCH4Q5T3I0 446 aaKnown RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 FAM160B2Q86V87 743 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 CCDC83Q8IWF9 413 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 CPXCR1Q8N123 301 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 PRPF38AQ8NAV1 312 aaKnown RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 CTCFLQ8NI51 663 aaPredicted RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 SMCR8Q8TEV9 937 aaPredicted RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 ZNF296Q8WUU4 475 aaPredicted RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 GTF3C6Q969F1 213 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 ZNF274Q96GC6 653 aaPredicted RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 MAP3K14Q99558 947 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 SPATC1LQ9H0A9 340 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 GJB4Q9NTQ9 266 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 DDX49Q9Y6V7 483 aaKnown RBP9.3□□□□□ -0.92
TRIM49-202ENST00000532501 SMCHD1A6NHR9 2005 aa9.3□□□□□ -0.92
TRIM49-202ENST00000532501 NFIBO00712 420 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
TRIM49-202ENST00000532501 FAM110CQ1W6H9 321 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 TMTC2Q8N394 836 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 NSUN7Q8NE18 718 aaKnown RBP9.29□□□□□ -0.92
TRIM49-202ENST00000532501 CD99L2Q8TCZ2 262 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 CLEC4DQ8WXI8 215 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 TBC1D5Q92609 795 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
TRIM49-202ENST00000532501 TMX3Q96JJ7 454 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 TRIM47Q96LD4 638 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
TRIM49-202ENST00000532501 SPZ1Q9BXG8 430 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 RABGAP1Q9Y3P9 1069 aa9.29□□□□□ -0.92
TRIM49-202ENST00000532501 FDPSP14324 419 aaKnown RBP9.28□□□□□ -0.92
TRIM49-202ENST00000532501 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 RCAN1P53805 252 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM49-202ENST00000532501 PLS1Q14651 629 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 SNRNP48Q6IEG0 339 aaKnown RBP9.28□□□□□ -0.92
TRIM49-202ENST00000532501 CHURC1Q8WUH1 139 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 COA7Q96BR5 231 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 FGD4Q96M96 766 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 SAGE1Q9NXZ1 904 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 LIMCH1Q9UPQ0 1083 aa9.28□□□□□ -0.92
TRIM49-202ENST00000532501 ASTN1O14525 1302 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 COL11A1P12107 1806 aaPredicted RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 ATP2A1O14983 1001 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 DHX16O60231 1041 aaKnown RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 ALDH1A1P00352 501 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 CALM1P0DP23 149 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 CALM2P0DP24 149 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 CALM3P0DP25 149 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 IFNAR1P17181 557 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 ERCC3P19447 782 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 GCLCP48506 637 aaPredicted RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 LBX1P52954 281 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 FOSBP53539 338 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 LACTBP83111 547 aaPredicted RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 USH1GQ495M9 461 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 OTUD7BQ6GQQ9 843 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 RIOX2Q8IUF8 465 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 SLKQ9H2G2 1235 aaPredicted RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 RNF146Q9NTX7 359 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 HOXC10Q9NYD6 342 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 COL20A1Q9P218 1284 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 CCPG1Q9ULG6 757 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 GABRQQ9UN88 632 aa9.27□□□□□ -0.93
TRIM49-202ENST00000532501 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
TRIM49-202ENST00000532501 PTPDC1A2A3K4 754 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 STXBP3O00186 592 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 ZBTB5O15062 677 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 ZBED4O75132 1171 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 ICAM1P05362 532 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 ALAS1P13196 640 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 KIF5BP33176 963 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 STAT3P40763 770 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms