RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 GRK4P32298 578 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 IRX3P78415 501 aaPredicted RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 NFX1Q12986 1120 aaKnown RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 LRRFIP1Q32MZ4 808 aaKnown RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 SLFNL1Q499Z3 407 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 SBK1Q52WX2 424 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 AMOTL1Q8IY63 956 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 SH3TC2Q8TF17 1288 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 STRBPQ96SI9 672 aaKnown RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 CABP5Q9NP86 173 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 STAP2Q9UGK3 403 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 RANBP2P49792 3224 aaKnown RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 PLIN4Q96Q06 1357 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 RNF113AO15541 343 aaKnown RBP8.46□□□□□ -1.06
ITGB1-218ENST00000528877 PRKAB2O43741 272 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 CYP2D6P10635 497 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 GNAT2P19087 354 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 RAB15P59190 212 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 RAB3GAP1Q15042 981 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 CTR9Q6PD62 1173 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 OTUD7AQ8TE49 926 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-218ENST00000528877 SOCS4Q8WXH5 440 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 LPAR1Q92633 364 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 OSBP2Q969R2 916 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 COA7Q96BR5 231 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 SHISA4Q96DD7 197 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 CCDC17Q96LX7 622 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 FEZ1Q99689 392 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 TXNRD2Q9NNW7 524 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 GABRQQ9UN88 632 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 RABGAP1Q9Y3P9 1069 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 SLC4A4Q9Y6R1 1079 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 RLFQ13129 1914 aa8.46□□□□□ -1.06
ITGB1-218ENST00000528877 PARP14Q460N5 1801 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 A0A1W2PRG0 241 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 GSG1L2A8MUP6 293 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L21D6R901 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 GPAA1O43292 621 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 MAN1A2O60476 641 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 GJB1P08034 283 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 MAPK4P31152 587 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 FLT3LGP49771 235 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 ERVK-9P63128 1117 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 ERVK-24P63145 666 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 ICA1Q05084 483 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 SEPT2Q15019 361 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 CATSPERGQ6ZRH7 1159 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 UBE2Q1Q7Z7E8 422 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 SMC5Q8IY18 1101 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 SLC44A5Q8NCS7 719 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 GPRC5AQ8NFJ5 357 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 ACER1Q8TDN7 264 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 USP6NLQ92738 828 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 DYNLL2Q96FJ2 89 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 P2RX7Q99572 595 aaKnown RBP8.45□□□□□ -1.06
ITGB1-218ENST00000528877 SH2D4AQ9H788 454 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 EPB41L4AQ9HCS5 686 aaPredicted RBP8.45□□□□□ -1.06
ITGB1-218ENST00000528877 PAK6Q9NQU5 681 aaPredicted RBP8.45□□□□□ -1.06
ITGB1-218ENST00000528877 RBPJLQ9UBG7 517 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 SYNPO2Q9UMS6 1093 aa8.45□□□□□ -1.06
ITGB1-218ENST00000528877 M0R2C6 588 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 SPINT1O43278 529 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 ADCY3O60266 1144 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 CNMDO75829 334 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 HMGCRP04035 888 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 INHAP05111 366 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 ADH1AP07327 375 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 XRCC5P13010 732 aaKnown RBP8.44□□□□□ -1.06
ITGB1-218ENST00000528877 CCL5P13501 91 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 AKR1B1P15121 316 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 EN2P19622 333 aaPredicted RBP8.44□□□□□ -1.06
ITGB1-218ENST00000528877 SOX11P35716 441 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 GJA8P48165 433 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 CDK8P49336 464 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 UBXN2AP68543 259 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 MTFR1Q15390 333 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 ZMYM1Q5SVZ6 1142 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 MAP3K21Q5TCX8 1036 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 SIAH1Q8IUQ4 282 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
ITGB1-218ENST00000528877 RPAP3Q9H6T3 665 aaPredicted RBP8.44□□□□□ -1.06
ITGB1-218ENST00000528877 VCPKMTQ9H867 229 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 NXF1Q9UBU9 619 aaKnown RBP8.44□□□□□ -1.06
ITGB1-218ENST00000528877 GJD2Q9UKL4 321 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 TMX2Q9Y320 296 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 ZMYM6O95789 1325 aa8.44□□□□□ -1.06
ITGB1-218ENST00000528877 CYP2D7A0A087X1C5 515 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms